Query= MSMg01no183_b21.b1 MSMg01no183_b21.b1 CHROMAT_FILE:
MSMg01no183_b21.b1 PHD_FILE: MSMg01no183_b21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:03 2005
(649 letters)
>mm_chr9_107676767_107677814
Length = 1048
Score = 1193 bits (617), Expect = 0.0
Identities = 638/645 (98%), Gaps = 1/645 (0%)
Strand = Plus / Minus
Query: 5 gaattccctgaaatgagagttaaaagcacttgtaagtgctgggaactgaacgtgggtcaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 gaattccctgaaatgagagttaaaagcacttgtaagtgctgggaactgaacgtgggtcaa 789
Query: 65 gtgttcttatatgctacccatctctctcagccctaatgaagatttttttcttttaataat 124
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 788 gtgttcttatatgctaagcatctctctcagccctaatgaaga-ttttttcttttaataat 730
Query: 125 ctgacctcagaaccaccgtgtctttatcagtttctgctactcctctaccagacaaatact 184
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 729 ctgacctcagaaccaccgtgtctttatcagttcctgctactcctctaccagacaaatact 670
Query: 185 tttatatgcctgctacacattttctagctcataagcccctcatttgtccagatccatttc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 tttatatgcctgctacacattttctagctcataagcccctcatttgtccagatccatttc 610
Query: 245 agaggtgtcttcttgcttaaaatcctttgacttttgatgatagctgttcaaattcgtgtc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 agaggtgtcttcttgcttaaaatcctttgacttttgatgatagctgttcaaattcgtgtc 550
Query: 305 cccttcattgtatttctgtggcacacatccatcattgctacatccatgactgatctcagt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 cccttcattgtatttctgtggcacacatccatcattgctacatccatgactgatctcagt 490
Query: 365 gtcctgtaaacatccattcacaaagtcttcaagttctttcccatgatcagggcccagtca 424
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gtcctgtaaatatccattcacaaagtcttcaagttctttcccatgatcagggcccagtca 430
Query: 425 tagtcacctctgcgcccacaggacaagcctagttacatgaatatcgggttgtgtttaata 484
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tagtcacctctgtgcccacaggacaagcctagttacatgaatatcgggttgtgtttaata 370
Query: 485 tacttattaggaagcagatctcagcaagagatcagcagctcaacttgaaaatggtggtag 544
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 369 tacttattaggaagcagatctcagcaagagatcagcagctcaccttgaaaatggtggtag 310
Query: 545 aagagtatctgtctctcttacagtgatcgtaaccctgttgataaagaagacactgacact 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 aagagtatctgtctctcttacagtgatcgtaaccctgttgataaagaagacactgacact 250
Query: 605 agtagcaaaggaggctgtgcccagcaggccactggctggaggaaa 649
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 agtagcaaaggaggctgtgcccagcaggccactggctggaggaaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1048
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1038
Effective search space: 663282
Effective search space used: 663282
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no183_b21.g1 MSMg01no183_b21.g1 CHROMAT_FILE:
MSMg01no183_b21.g1 PHD_FILE: MSMg01no183_b21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:03 2005
(496 letters)
>mm_chr9_107528752_107529647
Length = 896
Score = 959 bits (496), Expect = 0.0
Identities = 496/496 (100%)
Strand = Plus / Plus
Query: 1 acgggctaaggagaggcagctgacgtggcagccccgagggcagagattctcatgagcagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acgggctaaggagaggcagctgacgtggcagccccgagggcagagattctcatgagcagc 260
Query: 61 tgggaccacagggtaggcttgggcagcagcccagctccaagccacagcaccaggcccgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggaccacagggtaggcttgggcagcagcccagctccaagccacagcaccaggcccgcc 320
Query: 121 cacgctgccaccatcccagtggggcacagtggagatgggattgagcactgagatgcccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacgctgccaccatcccagtggggcacagtggagatgggattgagcactgagatgcccac 380
Query: 181 ctcacaggtaacccaactacgagagaggtaccacaccctcactgcccggtgacccctgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcacaggtaacccaactacgagagaggtaccacaccctcactgcccggtgacccctgcc 440
Query: 241 attctggatcctgtctgtcacctccttgccccacagcccagggtcttaggctcagctacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attctggatcctgtctgtcacctccttgccccacagcccagggtcttaggctcagctacc 500
Query: 301 accagggggagcccagctgccagagacaaagcagaggaggtggggggctgggcagcatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 accagggggagcccagctgccagagacaaagcagaggaggtggggggctgggcagcatgg 560
Query: 361 ggaatgttttgtttcagcaaagcagccttcccagctaggggtggctgggggaggtgccaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggaatgttttgtttcagcaaagcagccttcccagctaggggtggctgggggaggtgccaa 620
Query: 421 gaccctcagccacaacctccgccctgggaagcccccagccagctccagagtctgaattca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaccctcagccacaacctccgccctgggaagcccccagccagctccagagtctgaattca 680
Query: 481 caggaacaatggaaac 496
||||||||||||||||
Sbjct: 681 caggaacaatggaaac 696
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space: 430596
Effective search space used: 430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
