Query= MSMg01no183_c07.b1 MSMg01no183_c07.b1 CHROMAT_FILE:
MSMg01no183_c07.b1 PHD_FILE: MSMg01no183_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:05 2005
(317 letters)
>mm_chr9_62766001_62766717
Length = 717
Score = 598 bits (309), Expect = e-175
Identities = 312/313 (99%)
Strand = Plus / Minus
Query: 5 gaattcactctttgttaaatcttacaaatatttgtctccagtttgtatgctttttataaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 gaattcactctttgttaaatcttacaaatatttgtctccagtttgtatgctttttataaa 458
Query: 65 tgtgattacttatatgtagaattaaatttttatagtaccaaatactaaccagctttttgc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tgtgattacttatatgtagaattaaatttttatagtaccaaatactaaccagctttttgc 398
Query: 125 tttgtagtcttctccccttcccataatgctcagtctttgcatgcttcccacggttgggaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 397 tttgtagtcttctccccttcccataatgctcagtctttgcatgcttcccacggttggaaa 338
Query: 185 tagtagctcctagactaggaagaatgctccttgtgtatctttagatagttagtgcatctg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tagtagctcctagactaggaagaatgctccttgtgtatctttagatagttagtgcatctg 278
Query: 245 gaattcatgttgtttgagaatattttttcacttgttagggaacccaattctaatatcgct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gaattcatgttgtttgagaatattttttcacttgttagggaacccaattctaatatcgct 218
Query: 305 aagtaaatgaagt 317
|||||||||||||
Sbjct: 217 aagtaaatgaagt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no183_c07.g1 MSMg01no183_c07.g1 CHROMAT_FILE:
MSMg01no183_c07.g1 PHD_FILE: MSMg01no183_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:05 2005
(251 letters)
>mm_chr9_62602058_62602706
Length = 649
Score = 381 bits (197), Expect = e-110
Identities = 245/277 (88%), Gaps = 26/277 (9%)
Strand = Plus / Plus
Query: 1 tttgggtttcacgtaactcatggaaaacaaaataaccaggctagggctggagagatggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 tttgggtttcacgtaactcatggaaaacaaaataaccaggctagggctggagagatggct 232
Query: 61 cagtggttaagagccagactaaggtataggcgcagtcattctttgggcatgtgaccacag 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 233 cagtggttaagagccagactaaggtataggcgcagtcattctttgggcgtgtgaccacag 292
Query: 121 tacacacacacacgcacac------------------atgcac--------tcacatgga 154
||||||||||||||||||| || ||| ||||||||
Sbjct: 293 tacacacacacacgcacacgcacacgcgcacacacacatacacacacacactcacatggg 352
Query: 155 caatgctaagtgtatttagcctgctgctctttgacgatacagtgttgagtggagtcgaat 214
||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 353 caatgttaagtgtatttagcccgctgctctttgacgatacagtgttgagtggagttgaat 412
Query: 215 gaggaagactaggactgggggagttggaggggagagt 251
|||||||||||||||||||||||||||||||||||||
Sbjct: 413 gaggaagactaggactgggggagttggaggggagagt 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 649
Length adjustment: 9
Effective length of query: 242
Effective length of database: 640
Effective search space: 154880
Effective search space used: 154880
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
