Query= MSMg01no184_c07.b1 MSMg01no184_c07.b1 CHROMAT_FILE:
MSMg01no184_c07.b1 PHD_FILE: MSMg01no184_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:23 2005
(308 letters)
>mm_chr9_81477484_81478192
Length = 709
Score = 545 bits (282), Expect = e-159
Identities = 297/302 (98%), Gaps = 1/302 (0%)
Strand = Plus / Minus
Query: 8 ttctgac-cagcctggtgaggactttaaagaggtattgtgagacctgaggttataaccta 66
||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ttctgacacagcctgttgaggactttaaagaggtattgtgagacctgaggttataaccta 450
Query: 67 acactcaggtctctgcaagtttcttaatggcagtagaagctgagattatataacttgctc 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 acactcaggtctctgcaagtttcttaatggcagtagaagctgagattatataacttgctc 390
Query: 127 ttgtgttggggaggggtgtgtgtgttttcttatcccttcctgaagatgttttattaattc 186
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ttgtgttggggaggggggtgtgtgttttcttatcccttcctgaagatgttttattaattc 330
Query: 187 tcttgttcccctgttgcttccatttctttcattaccagtttaagatagtccttcagccaa 246
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ttttgttcccctgttgcttccatttctttcattaccagtttaagatagtccttcagccaa 270
Query: 247 atgcttttcaaatgttagttattcttagtctttcctatgcttagttgtgaaggacttaaa 306
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 269 atgcttttcaaatgttagttattcttagtctttcctatgcttagttgtgagggacttaaa 210
Query: 307 aa 308
||
Sbjct: 209 aa 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 308
Length of database: 709
Length adjustment: 9
Effective length of query: 299
Effective length of database: 700
Effective search space: 209300
Effective search space used: 209300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no184_c07.g1 MSMg01no184_c07.g1 CHROMAT_FILE:
MSMg01no184_c07.g1 PHD_FILE: MSMg01no184_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:23 2005
(284 letters)
>mm_chr9_81334469_81335156
Length = 688
Score = 522 bits (270), Expect = e-153
Identities = 282/288 (97%), Gaps = 4/288 (1%)
Strand = Plus / Plus
Query: 1 tttctaactgaatcctaatgccttcctgcccactaagggttcttagttttgcatttcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttctaactgaatcctaatgccttcctgcccactaagggttcttagttttgcatttcctt 260
Query: 61 tatttgcatttcctgtcactttcacattctaagtctttctatccagtgatttgaacacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatttgcatttcctgtcactttcacattctaagtctttctatccagtgatttgaacacac 320
Query: 121 acctacttcaaaacaaa----gaaacaaacaaggtctgggaattactaatcctaaaattt 176
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acctacttcaaaacaaacaaagaaacaaacaaggtctgggaattactaatcctaaaattt 380
Query: 177 attccacagcactatgagaagttcttgctgtttttggaggagcatgatgtggagacagag 236
|||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 attctacagcactatgagaagttcttgctgtttttggaggagcatgatctggagacagag 440
Query: 237 gctcctctccagagccttatcagtaactgagacagagttagaacccat 284
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctcctctccagagccttatcagtaactgagacagagttagaacccat 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 688
Length adjustment: 9
Effective length of query: 275
Effective length of database: 679
Effective search space: 186725
Effective search space used: 186725
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
