Query= MSMg01no185_a06.b1 MSMg01no185_a06.b1 CHROMAT_FILE:
MSMg01no185_a06.b1 PHD_FILE: MSMg01no185_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:37 2005
(329 letters)
>mm_chr9_39237764_39238486
Length = 723
Score = 383 bits (198), Expect = e-111
Identities = 280/312 (89%), Gaps = 16/312 (5%)
Strand = Plus / Plus
Query: 23 tctttgaacatctata-ttatgtatcttctcctgatgcctcac-aaccattaatttgtat 80
|||||||||||||||| || |||||||||| | |||||||| | |||||||| ||||||
Sbjct: 223 tctttgaacatctatatttttgtatcttcttcagatgcctc-ctaaccatta--ttgtat 279
Query: 81 tctctagctcattgagctcttacttctacaaataattcatataagtggatctatacag-- 138
|||||||||||||||| ||||||||||||||||||||||||||| ||||||| | |||
Sbjct: 280 tctctagctcattgagttcttacttctacaaataattcatataaatggatctgtgcagtt 339
Query: 139 -tccttttcctttcatgtctggcttattcatcacagaaaagtgtctgtcaggttagttaa 197
| |||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||
Sbjct: 340 tt--ttttcctttcatgtctggcttatttatcacagtaaagtgtctgtcaggttagtcaa 397
Query: 198 gatttttttcaagcaatgtaatttcccttataaggaagtgaaaaagtcagtgaagattca 257
||||||||| |||||||||| |||||||||| ||| ||||||||||||||| |||||
Sbjct: 398 gattttttt-aagcaatgtagtttcccttat-agg----gaaaaagtcagtgaatattca 451
Query: 258 gaacaacctaatatacattcacaatttttgtatcatatgctatttactattaaccaatat 317
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 452 gaacaacctaatatacattcacaattttcgtatcatatgctatttactattaactaatag 511
Query: 318 aaaatatgaatg 329
| ||||||||||
Sbjct: 512 ataatatgaatg 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 723
Length adjustment: 9
Effective length of query: 320
Effective length of database: 714
Effective search space: 228480
Effective search space used: 228480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no185_a06.g1 MSMg01no185_a06.g1 CHROMAT_FILE:
MSMg01no185_a06.g1 PHD_FILE: MSMg01no185_a06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:37 2005
(358 letters)
>mm_chr9_39396812_39397569
Length = 758
Score = 627 bits (324), Expect = 0.0
Identities = 348/356 (97%)
Strand = Plus / Minus
Query: 1 tctgtctgtgcaggtgttagaaccctcagcctgggctacaatgctgcccgtgatctggct 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 556 tctgtctgtgcaggtgttagaaccctcagcctgggctacaatgctggccgtgatctggct 497
Query: 61 gcatgccaatggcaaggaattgaaggacgagtgggagcttctggaaagaaaggctgtggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gcatgccaatggcaaggaattgaaggacgagtgggagcttctggaaagaaaggctgtggt 437
Query: 121 ttggcttcacaataattcaggtaggaacacaaacacggcccccaccccttttccttcttc 180
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 436 ttggcttcacaataattcaggtaggaacacaaacacagcctccaccccttttccttcttc 377
Query: 181 tttaggaaggcagctactgtgactcaaggcctgacagagaataagcactggatagtccct 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 376 tttaggaaggcagctactgtgactccaggcctgacagagaataagcactggatagtccct 317
Query: 241 gaattcattgccaccatgctaatttggagcttttctgctcccttatcttatctttctgcg 300
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 316 gaattcattgccaccatgctaatttggagcttttctgctcccttagcttatctttctgtg 257
Query: 301 ccagtatatggtgaagttcataaatgggggtggaaaggggtgagtataggtggaag 356
||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gcagtatatggtgacgttcataaatgggggtggaaaggggtgagtataggtggaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 358
Length of database: 758
Length adjustment: 9
Effective length of query: 349
Effective length of database: 749
Effective search space: 261401
Effective search space used: 261401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
