NNCCAACNNNNNCCTGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXCGCGGAATTCTTTGTTCAGCTCTGAGCCCCATTTTTAA
TGGGGTTATTTGATTTTCTGGAGTCCACCTTCTTGAGTTCTTTATATATA
TTGGATATTAGTCCCCTATCCGATTTGGGATAGGTAAAGATCCTTTCCCA
ATCTGTTGGTGGCCTTTTTGTCTTATTGACGGTGTCTTTTGCTTTGCAGA
AGCTTTGCAATTTTATGAGGTCCCATTTATCGATTCTTGATCTTACAGCA
CAAGCCATTGTTGTTCTATTCAGGAATTTTTCCCCTGTACCCATATCTTC
AAGGCTTTTCCCTACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTA
TGTGGAGTTCCTTAATCCACTTAGATTTGACCTTAGTACAAGGAGATAGA
AATGGATCAATTCGCATTCTTCTACATGATAACCGCCAGTTGTGCCAGCA
CCATTTGGTGAAAATGCTGTCTTTTTTCCACTGGATGGTTTTAGCTCCCT
TGTCAAAGATCAAGTGACCATAGGTGTGTGGATTCATCTCTGGGTCTTCA
ATTCTGTTCCATTGGTCTACTTGTCTGTCACTATACCAGTACCATGCAGT
TTTGATCACAATTGCTCTGTAGTACAGTTTTAGGTCCGGCATGGTGATTC
CACCAGAGGTTCTTTTATCCTTGAGAAGATGAATTCCTAGGC

NTTTTCCCCNNCCCTCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGTCTTCC
TCAGTTCAGCATTAAGGTGACAGGATAAACAAAAGGCAAAGGGTATGAAA
AGGATGTTGCAGTGACGAAAACCCCCTGTCAGAAAGGATCATCTTAGCTG
TTTCACTGTGAGGGGCAGACAGATCACCTGCATTGACACAGGGGCACAAA
GGAGTGATGAAGGACACTCCCCATGGGACTTTGACTCCTTCATGAAATCA
GAAGAAAGCATCTGAGGCCCTGTCCTCTGGTTTCCATGGAGCCTGTGCTC
TGGTCTTTTCCCGGGAGCAGGCCTTTGGTTCTAGATCTGACTGATCATTG
GGTTTTGAGAACCAAAGTGCAGCATCTAAGAAACTTAGGATTGGACTAAC
CGGACATTCCATTTGCTCTAGTACCCCTTAACATGTTTCTTGGATCCTAT
GCTGATCTGCTCAACACGTATTTAAGAAGCACTCGGTGTTTCCCACCTGT
TCCACAGACCCTGATATATAGCAGCAGAGAGTGAACCAGCAATGGTCTTT
CCCCAGGAAGCCAATATTCTAGTAGAAGGAAAGGAACTTAGGGGAAATCT
ATAGATATGTTATAATCTAGGGGCCAAAAAATAAAATATGCCAGGAGAAT
ATGTAAAGTCAGGATGGCAGTAGGAGGCCTTTGTGAAAAGTGATTA

Query= MSMg01no185_d05.g1 MSMg01no185_d05.g1 CHROMAT_FILE:
MSMg01no185_d05.g1 PHD_FILE: MSMg01no185_d05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:50 2005
         (616 letters)



>mm_chr9_53066860_53067875
          Length = 1016

 Score = 1096 bits (567), Expect = 0.0
 Identities = 607/627 (96%), Gaps = 11/627 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagtcttcctcagttcagcattaaggtgacaggataaacaaaaggcaaagggtatgaaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 aagtcttcctcagttcagcattaaggtgacaggataaacaaaaggcaaagggtatgaaaa 578

                                                                       
Query: 61  ggatgttgcagtgacgaaaaccccctgtcagaaaggatcatcttagctgtttcactgtga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ggatgttgcagtgacgaaaaccccctgtcagaaaggatcatcttagctgtttcactgtga 518

                                                                       
Query: 121 ggggcagacagatcacctgcattgacacaggggcacaaaggagtgatgaaggacactccc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 517 ggggcagacagatcacctgcattgacacaggggcacaaaggagtgatgaaggacaatccc 458

                                                                       
Query: 181 catgggactttgactccttcatgaaatcagaagaaagcatctgaggccctgtcctctggt 240
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 457 catgggactttgactccttcatgaaatcagaagaaagcgtctgaggccctgtcctctggt 398

                                                                       
Query: 241 ttccatggagcctgtgctctggtcttttcccgggagcaggcctttggttctagatctgac 300
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 397 ttccatggagcctgtgctctggtcttttcccgggagcaggcctttgggtctagatctgat 338

                                                                       
Query: 301 tgatcattgggttttgagaaccaaagtgcagcatctaagaaacttaggattggactaacc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tgatcattgggttttgagaaccaaagtgcagcatctaagaaacttaggattggactaacc 278

                                                                       
Query: 361 ggacattccatttgctctagtaccccttaacatgtttcttggatcctatgctgatctgct 420
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 277 ggacattccatttgctctagtaccccttaacatgtttcttgaatcctatgctgatttgct 218

                                                                       
Query: 421 caacacgtatttaagaa-----------gcactcggtgtttcccacctgttccacagacc 469
           |||||||||||||||||           ||||||||||||||||||||||||||||||||
Sbjct: 217 caacacgtatttaagaatgctttaagaagcactcggtgtttcccacctgttccacagacc 158

                                                                       
Query: 470 ctgatatatagcagcagagagtgaaccagcaatggtctttccccaggaagccaatattct 529
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 ctgaaatatagcagcagagagtgaaccagcaatggtctttccccaggaagccaatattct 98

                                                                       
Query: 530 agtagaaggaaaggaacttaggggaaatctatagatatgttataatctaggggccaaaaa 589
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 97  agtagaaggaaaggaacttaggggaaatctatagatatgttatattctaggggccaaaaa 38

                                      
Query: 590 ataaaatatgccaggagaatatgtaaa 616
            ||||||||||||||||||||||||||
Sbjct: 37  ttaaaatatgccaggagaatatgtaaa 11


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space:   609636
Effective search space used:   609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)