CAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCACTTTCTATCTATAGCATCCCTCCGTTTGGTTTTCCTTTTTAACAT
TTATTTCCCAAGATGTTTGCAGAGAAACCTCAGAAGTGCAGTAACTCTCT
CTTACCATGCCCCTGCCCAGCTCCCATCAACCTCATTATCCATCCTGGGC
ACACCCTCAGTCAACAGGAGCAGAAGTCTAGGACAGTGGCTTATTGGCTT
TTAGGACAGTGGCCTTGGCTGCTTTACTTGAAGGATAAATTTTGTAAAGC
TGTATGCACCCCACCACACACTTGTATATTTTTAAGTTGGCATCTAAAAA
CGTTCACCTTAGGTTCAAATAGTTGCAAAAGATGTAATTTCTGGCATAGT
GATATTTTAAGACAGCCCAGTTCCAGCATTTATTTATCTATTTATCTATC
TATCTATTTATTTATTTATTTATTTTTGACGAAATCTTATGTAGCCCAGG
CTAGCCTCAAATTTACTATGTAACCAAAAAAAAAAAAAAACCCCTTGAAC
TTTGAACCTCTTGTTTCTGCTTCTCCCAAGTGCTTGGTGGTAGACAGCCC
CGCACTAGGTTTTTATCCAGTGATGGGGATAAAATTCAGGACTTTATGTA
TGATAGACAAGTTATGTACCAACTTAGCTACATCTTCAGACCCAGTCACA
ACACTCTTTAAAN

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTTCTACAGGAGATAGGCCAGACA
CAAGACGCACAACCGTGATACACCTTGCTGGCTTTATGATCTGGCAGGAA
GACAACAAGAAATGGTTGGGGGTGGCTCACCTGGAGCTGGTGAGCCTATT
TGCTTTGCCAGTGTGAGGATTAGAGTTAGGTCCCTAAAACCAATGTGAAA
AAAATTAAGGTGTTGTGGGATGTTGGGGAGGCAGAGACAGGCAGGAAAGC
TTAGGATTCCCTGTCCAAGCAGCCTAGCCTACTCCATGATTTCCACGCCA
ATAAGATTCTCTAATCTCACCCCCCAAAACAAAAAAGGCGGAGGCCTGAA
GGGGTGGCCCAGCGCCCAAAACCACTGGCGGTTCTTGCAGGGGCTTGGGG
TTCGATTTCTTATACCTACGTGCTGTTCACCATCCTTTGTCCATTTGTAA
GTCTGGAAGCTGAGGCAGGAGGATTGATTGCTTCAGCCCAGAAGGTCTAG
CCAGCCTGGGTAAGAGTGAGACCCCATTAAGACAAAATCAAACAATATAT
AACCGGAAGTAAGCCACAGAAAAATGACAGCCAAGTCTTTGAGCCAGGAG
GCGTGAACTCCACGTGCCCAGATGTGGTTCCTTATGTCTCTGAGGCACTC
CCCCTCTCTAGTTGTCC

Query= MSMg01no185_o09.b1 MSMg01no185_o09.b1 CHROMAT_FILE:
MSMg01no185_o09.b1 PHD_FILE: MSMg01no185_o09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:43 2005
         (666 letters)



>mm_chr9_70007962_70009027
          Length = 1066

 Score = 1060 bits (548), Expect = 0.0
 Identities = 629/662 (95%), Gaps = 13/662 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcactttctatctatagcatccctccgtttggttttcctttttaacatttatttcc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactttctatctatagcatccctccgtttggttttcctttttaacatttatttcc 264

                                                                       
Query: 65  caagatgtttgcagagaaacctcagaagtgcagtaactctctcttaccatgcccctgccc 124
           ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 265 caagatgcttgcagagaaacctcagaagtgcggtaactctctcttaccatgcccctgccc 324

                                                                       
Query: 125 agctcccatcaacctcattatccatcctgggcacaccctcagtcaacaggagcagaagtc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agctcccatcaacctcattatccatcctgggcacaccctcagtcaacaggagcagaagtc 384

                                                                       
Query: 185 taggacagtggcttattggcttttaggacagtggccttggctgctttacttgaaggataa 244
           |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 385 taggacagtggcttattggcttataggacagtggccttggctgctttacttgaaagataa 444

                                                                       
Query: 245 attttgtaaagctgtatgcaccccaccacacacttgtatatttttaagttggcatctaaa 304
           |||||||||||||||| |||||  ||| | | ||||||||||||||||||||||||||||
Sbjct: 445 attttgtaaagctgtacgcacc--acccc-c-cttgtatatttttaagttggcatctaaa 500

                                                                       
Query: 305 aacgttcaccttaggttcaaatagttgcaaaagatgtaatttctggcatagtgatatttt 364
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacgttcaccgtaggttcaaatagttgcaaaagatgtaatttctggcatagtgatatttt 560

                                                                       
Query: 365 aagacagcccagttccagcatttatttatctatttatctatctatctatttatttattta 424
           ||||||||||||||| ||||||||||||| ||||||| ||| ||| ||||||||||||||
Sbjct: 561 aagacagcccagttctagcatttatttatttatttatttatttatttatttatttattta 620

                                                                       
Query: 425 tttatttttgacgaaatcttatgtagcccaggctagcctcaaatttactatgtaaccaaa 484
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttatttatgacgaaatcttatgtagcccaggctagcctcaaatttactatgtaaccaaa 680

                                                                       
Query: 485 aaaaaaaaaaaaccccttgaactttgaacctcttgtttctgcttctcccaagtgcttggt 544
           || ||         ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aataa---------ccttgaactttgaacctcttgtttctgcttctcccaagtgcttggt 731

                                                                       
Query: 545 ggtagacagccccgcactaggtttttatccagtgatggggataaaattcaggactttatg 604
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 ggtagacagccccacactaggtttttatccagtgatggggataaaattcaggactttatg 791

                                                                       
Query: 605 tatgatagacaagttatgtaccaacttagctacatcttcagacccagtcacaacactctt 664
           |||||||| ||||  |||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 792 tatgataggcaagccatgtaccaacttagctacatctccagactcagtcacaacactctt 851

             
Query: 665 ta 666
           ||
Sbjct: 852 ta 853


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space:   692736
Effective search space used:   692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)