Query= MSMg01no187_n04.b1 MSMg01no187_n04.b1 CHROMAT_FILE:
MSMg01no187_n04.b1 PHD_FILE: MSMg01no187_n04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:03:15 2005
(323 letters)
>mm_chr9_81642286_81643008
Length = 723
Score = 275 bits (142), Expect = 3e-78
Identities = 151/154 (98%)
Strand = Plus / Minus
Query: 5 gaattcagtttgatacaaataacatgccatgctatttttagtactgcagaccttgttact 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gaattcagtttgatagaaataacatgccatgctatttttagtactgcagaccttgttact 299
Query: 65 agccatttcaagggttgaggaagaagaatttattgagttataataataactgggttatag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 agccatttcaagggttgaggaagaagaatttattgagttataataataactgggttatag 239
Query: 125 aacaagtgcaaggccctgttggttaaggctcaat 158
|||||||||||||||| |||||||||||| ||||
Sbjct: 238 aacaagtgcaaggcccagttggttaaggcccaat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no187_n04.g1 MSMg01no187_n04.g1 CHROMAT_FILE:
MSMg01no187_n04.g1 PHD_FILE: MSMg01no187_n04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:03:15 2005
(591 letters)
>mm_chr9_81590281_81591272
Length = 992
Score = 965 bits (499), Expect = 0.0
Identities = 571/599 (95%), Gaps = 9/599 (1%)
Strand = Plus / Plus
Query: 1 agtggattattttcctcgcctgggcaaacatgttttaatatgattttacctcaattttta 60
|||||||||||||| ||| ||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 195 agtggattattttcatcgtctgggcaaaaatgttttaatatgattttagctcaattttta 254
Query: 61 aattgcttttgtttctcatgctttt------gggggagtggtcattttgtaaatgcctac 114
||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 255 aattgcttttgtttctcatgcttttgggggggggggagcagtcattttgtaaatgcctat 314
Query: 115 tctgttatcaaatctagagatcccggtcctttctgaacgtgaagaagaaagtggatgcct 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tctgttatcaaatctagagatcccggtcctttctgaacgtgaagaagaaagtggatgcct 374
Query: 175 tataatcaactaa--aaaaattccgggaagcatttctgaaagtagtcagaaagcaagctt 232
|| |||||||||| || || |||||||||||||||||||||||||||||||||||||||
Sbjct: 375 taaaatcaactaaggaataa-tccgggaagcatttctgaaagtagtcagaaagcaagctt 433
Query: 233 ggagacaggctggcctcaccagtgccctctgggctgggcatttaaaaggccactgggtac 292
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 434 ggagacaggctggcctcaccagtgccctctgggctgggcatttagaaggccactgggcac 493
Query: 293 acccctcctccctggatattttattcacagtctcaactgcatggtctttggcccagaaag 352
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 494 acccctcctccctggatattttattcacagtctcaactgcatggtctttggcccagggag 553
Query: 353 aaagacaagggaggtcacatctagtctgtaagaggacttgttatctctggttacctttga 412
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 554 aaagacaagggaggtcacatatagtctgttagaggacttgttatctctggttacctttga 613
Query: 413 gatgctgtgtgggaatgtaatctctttccctccacctcttccctaattgtctaatttcta 472
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gatgctatgtgggaatgtaatctctttccctccacctcttccctaattgtctaatttcta 673
Query: 473 atatcgcctcacagttccagtttcctgatgttttcttctagttcttcttatttccttcta 532
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 atattgcctcacagttccagtttcctgatgttttcttctagttcttcttatttccttcta 733
Query: 533 gtagttccagagaattagtcttacatttaagccttttgctgctggtgctgttgtttgag 591
|||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 734 gtagttccagagaattagtcttacatttaagccttttgctgctgttgatgttgtttgag 792
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 992
Length adjustment: 10
Effective length of query: 581
Effective length of database: 982
Effective search space: 570542
Effective search space used: 570542
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
