Query= MSMg01no188_b08.b1 MSMg01no188_b08.b1 CHROMAT_FILE:
MSMg01no188_b08.b1 PHD_FILE: MSMg01no188_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:03:36 2005
(252 letters)
>mm_chr9_65460823_65461474
Length = 652
Score = 395 bits (204), Expect = e-114
Identities = 237/248 (95%)
Strand = Plus / Minus
Query: 5 gaattcttcccagtgcttgtcacaaaggggatagtctgactggggatgctttgcccatag 64
||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||
Sbjct: 452 gaattcttcccagtgcttgtcacaaaggggacagtcaaactggggatgcttggcccatag 393
Query: 65 aagcacacctctacactctcaccatttctgactctcctttagccatgctgtctctagtga 124
|||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 392 aagcacacctctaccctctcaccacatctgactctcctttagccatgctgtctctagtga 333
Query: 125 taacagcagacccctgcatactggtctgaggaagcctgacagttgaggctgacaagttct 184
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 332 taacagcagacccctgcatactggtctgaggaagcctgacaggtgaggctgacaagttcc 273
Query: 185 agacccaagccttgggcctcacatcgtcccacagaaccataggctgggcagaagccagtg 244
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 272 agacccaagccttgggcctcacatcgtcccacagaaccagaggctgggcagaagccagag 213
Query: 245 ctaagctt 252
||||||||
Sbjct: 212 ctaagctt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 252
Length of database: 652
Length adjustment: 9
Effective length of query: 243
Effective length of database: 643
Effective search space: 156249
Effective search space used: 156249
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no188_b08.g1 MSMg01no188_b08.g1 CHROMAT_FILE:
MSMg01no188_b08.g1 PHD_FILE: MSMg01no188_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:03:36 2005
(289 letters)
>mm_chr9_65377641_65378329
Length = 689
Score = 447 bits (231), Expect = e-130
Identities = 266/293 (90%), Gaps = 26/293 (8%)
Strand = Plus / Plus
Query: 1 tgcaggaaggcctctgggttcactgttggcctctgaatcagcaatgtcacaagaagggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcaggaaggcctctgggttcactgttggcctctgaatcagcaatgtcacaagaagggct 260
Query: 61 gtcaagatggttcatcagggaaaggcactgccaccaagccttataatgagagtgccagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcaagatggttcatcagggaaaggcactgccaccaagccttataatgagagtgccagga 320
Query: 121 aggagaaagaaaagttattcccacaagttatgaagttatgtactctctctctctctctct 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 aggagaaagaaaagttattcccacaagttatgaagttatgtactctctctctctctct-t 379
Query: 181 ctctctctctctctctctctctctccttcctcccttcctcctccctccctttctctctct 240
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 -------------------tctctccttcctcccttcctcctccctccctttctctctct 420
Query: 241 gtctctgtctctgtctctc------acacacaaacacacaaaataaacacata 287
||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 421 gtctctgtccctgtctctctctctcacacacaaacacacaaaataaacacata 473
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
