Query= MSMg01no189_o22.b1 MSMg01no189_o22.b1 CHROMAT_FILE:
MSMg01no189_o22.b1 PHD_FILE: MSMg01no189_o22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:01 2005
(320 letters)
>mm_chr9_32496654_32497373
Length = 720
Score = 572 bits (296), Expect = e-168
Identities = 311/316 (98%)
Strand = Plus / Plus
Query: 5 gaattcattatgaaactgtcatgggattcactaagcgagatatctgtggataactgtagg 64
|||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 205 gaattcattatgaaactgtcatgggactcactaagccagatatctgtggataactgtagg 264
Query: 65 aatgtactcaaactgtgtttacttgttaggaccaagttcccagtatgactcatttgagtt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatgtactcaaactgtgtttacttgttaggaccaagttcccagtatgactcatttgagtt 324
Query: 125 tttcttgcttttcggtactggaaaaagaaatgcaaactaatgtgtgtttgtccacaattc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttcttgcttttcggtactggaaaaagaaatgcaaactaatgtgtgtttgtccacaattc 384
Query: 185 ccgttaggacccatggatttcttggtttccatggctgaagattagccaaattttctgttc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccgttaggacccatggatttcttggtttccatggctgaagattagccaaattttctgttc 444
Query: 245 ctacatcttgattatctactcacagatgcaaatagatgcatagagtgtgagtctatctcc 304
|||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 445 ctacatcttggttatctacttacagatgcaaatagatgcagagagtgtgagtctatctcc 504
Query: 305 aagagagaggtcagcc 320
||||||||||||||||
Sbjct: 505 aagagagaggtcagcc 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no189_o22.g1 MSMg01no189_o22.g1 CHROMAT_FILE:
MSMg01no189_o22.g1 PHD_FILE: MSMg01no189_o22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:02 2005
(287 letters)
>mm_chr9_32631045_32631732
Length = 688
Score = 526 bits (272), Expect = e-154
Identities = 284/288 (98%), Gaps = 1/288 (0%)
Strand = Plus / Minus
Query: 1 agttccggcttgtgt-aaaaaaaagcgtatgggggcgggatgtatggaccagaaggagcc 59
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 488 agttccggcttgtgtaaaaaaaaagagtatgggggcgggatgtatggaccagaaggagcc 429
Query: 60 aagcaggagaggccagagctttggaacttgtactcgctgtgatgggaagggtgatgggca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 aagcaggagaggccagagctttggaacttgtactcgctgtgatgggaagggtgatgggca 369
Query: 120 gcgggaggagggatacctcaagcctggattcccagtggaaactgtatccttccctgctct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gcgggaggagggatacctcaagcctggattcccagtggaaactgtatccttccctgctct 309
Query: 180 tgatgcctgccagcctctgtcccggacactcttaaaaactgatagaagtatgagctgaaa 239
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tgatgcctgccagcctctatcccggacactcttaaaaactgatagaagtatgagctgaaa 249
Query: 240 gctgtgcccttgtcagatcagcaggaggtcaccacaatcattcaatta 287
|||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 248 gctgtgcccttgccagatcagcaggaggtcaccacaatcattcaatta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 688
Length adjustment: 9
Effective length of query: 278
Effective length of database: 679
Effective search space: 188762
Effective search space used: 188762
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
