CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCAGTCATGAAATAGAGATATTTTCCTTCTGACTGAAAAAAAAATG
GTTTGATTTTGGAGCCAGCCACGCATAAGCTATGCTCAAATGTTTTATTT
ATTTCTATGTCTAAGACTTGGGAATTAACTCTAATCCATGTATGGATGTC
TGATCTTGATCTTTGCATGCTTAAAGACTTAGAGTGCTTTATCCTCAGGA
AATGTTAGTCATATTGTCTATTTTTATCTATGCCACTTAAATAAATACCA
TCAATTGGAAATCTCCACTAGACTTCATTTATTCTTAAAAAGAAAGAAAG
ACTATTTACGTCACACAGCTGTACATAGAAGAGGGTAAGTTTCCCAGCCC
AGTCTCTTGTGAATGTCTTAGATTTTATCAAGTGGCAAGATAAAACACCC
ACACAGCTGTGGCAAATCCTTCATGGTCATGGACAATGGTAGAAGGGACC
AGGTCAGTGTTAGGTCCTCCCAGTCATCCCAGGGCTGCTCAAGGTCCTGC
TCAATGGGGCAGGGGGGACAAAAAGGCAGCACCACCCCCACGTAAAATGT
AAAGAATGGAGAGTTTTTAATTTTTTTCCAAAGTTTAAAGCCAGTTCATT
AGCCAGAAACTGACTACACTGGGTATTCAGAATGACAGTATAACTCCTTT
CTCAGAGTGAGTTTTTAAGCAAAACAAACN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAGTGGCA
GAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCA
AATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGA
TCAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGA
ACACTCCTCCATTGTTGGTGGGATGGCAGGCTTGTACAGCCACTCTGGAA
ATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATC
CAGCAATATTTTTTCTGGCCCCATACCCAGAAGATGCCCCAACTGGTAAG
AAGGACACATGCTCCACTATGTTCATAGAAGCCTTATTTATAATAGCCAG
AAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAA
TGTGGTACATCTACACAATGGAGTACTACTCAGCTGTTAAAAAGAATGAA
TTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAG
TGAGGTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAA
GTGGATATTAGCCCAAAACCTAGGATACCCAGGATATAAGATACAATTTC
CTAAACACATGAAACTCAAGAAAAATGAAGACAGAA

Query= MSMg01no191_h10.b1 MSMg01no191_h10.b1 CHROMAT_FILE:
MSMg01no191_h10.b1 PHD_FILE: MSMg01no191_h10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:04 2005
         (675 letters)



>mm_chr9_81920887_81921966
          Length = 1080

 Score = 1195 bits (618), Expect = 0.0
 Identities = 662/678 (97%), Gaps = 9/678 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccagtcatgaaatagagatattttccttctgactg-aaaaaaaaatggtttgatt 63
           ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 796 gaattccagtcatgaaatagagatatttttcttctgactgaaaaaaaaaatggtttgatt 737

                                                                       
Query: 64  ttggagccagccacgcataagctatgctcaaatgttttatttatttctatgtctaagact 123
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 ttggagccagcca-gcataagctatgctcaaatgttttatttatttctatgtctaagact 678

                                                                       
Query: 124 tgggaattaactctaatccatgtatggatgtctgatcttgatctttgcatgcttaaagac 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tgggaattaactctaatccatgtatggatgtctgatcttgatctttgcatgcttaaagac 618

                                                                       
Query: 184 ttagagtgctttatcctcaggaaatgttagtcatattgtctatttttatctatgccactt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ttagagtgctttatcctcaggaaatgttagtcatattgtctatttttatctatgccactt 558

                                                                       
Query: 244 aaataaataccatcaattggaaatctccactagacttcatttattcttaaaaagaaagaa 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 aaataaataccatcaattggaaatctccactagacttcatttattcttaaaaagaaagaa 498

                                                                       
Query: 304 agactatttacgtcacacagctgtacatagaagagggtaagtttcccagcccagtctctt 363
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 agactatttaagtcacacagctgtacatagaagagggtaagtttcccagcccagtctctt 438

                                                                       
Query: 364 gtgaatgtcttaga-ttttatcaagtggcaagataaaacacccacacagctgtggcaaat 422
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gtgaatgtcttagatttttatcaagtggcaagataaaacacccacacagctgtggcaaat 378

                                                                       
Query: 423 ccttcatggtcatggacaatggtagaagggaccaggtcagtgttaggtcctcccagtcat 482
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 377 ccttcatggtcatggacaatggtagaagggaccagatcagtgttaggtcctcccagtcat 318

                                                                       
Query: 483 cccagggctgctcaaggtcct-gctcaatggggc--aggggggacaaaaaggcagcacca 539
           ||||||||||||||||||||| ||| ||||||||   |||||||||||||||||||||||
Sbjct: 317 cccagggctgctcaaggtcctggctgaatggggcgggggggggacaaaaaggcagcacca 258

                                                                       
Query: 540 cccccacgtaaaatgtaaagaatggagagtttttaa--tttttttccaaagtttaaagcc 597
           ||||||| ||||||||||||||||||||| ||||||  ||||||||||||||||||||||
Sbjct: 257 cccccacataaaatgtaaagaatggagag-ttttaatttttttttccaaagtttaaagcc 199

                                                                       
Query: 598 agttcattagccagaaactgactacactgggtattcagaatgacagtataactcctttct 657
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 198 agttcattagccagaaactgactacactgggtattcagaatgacagtgtaactcctttct 139

                             
Query: 658 cagagtgagtttttaagc 675
           ||||||||||||||||||
Sbjct: 138 cagagtgagtttttaagc 121


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 7
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1080
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1070
Effective search space:   711550
Effective search space used:   711550
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)