Query= MSMg01no191_h12.b1 MSMg01no191_h12.b1 CHROMAT_FILE:
MSMg01no191_h12.b1 PHD_FILE: MSMg01no191_h12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:05 2005
(309 letters)
>mm_chr9_44664424_44665133
Length = 710
Score = 561 bits (290), Expect = e-164
Identities = 302/306 (98%), Gaps = 1/306 (0%)
Strand = Plus / Minus
Query: 5 gaattctacttagggggtgacattgggtagcttactttaacataaatcacgggacactaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gaattctacttagggggtgacattgggtagcttactttaacataaatcacgggacactaa 412
Query: 65 atatgatttaatattatttatagagctcaacttgacta-ggggtttttcaatcttggagc 123
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 411 atatgatttaatattatttatagagctcaacttgactagggggtttttcaatcttggagc 352
Query: 124 ttagaaaactgctgaactctaagcagcctagcctccaggagcatcgctgactgcgaggga 183
| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 351 taagaaaactgctgaactctaagcggcctagcctccaggagcatcgctgactgcgaggga 292
Query: 184 caggtgttctggctcttgcctatacgttgtctaggaatgctgtgcttctcagatgaggcc 243
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 291 caggtgttctggctcttgcctatacgttgtctaggaatgctgtgctcctcagatgaggcc 232
Query: 244 ctgaggaaggaaggggtgtgtgtgttggctgggtatggtggcacacacttttagtcccag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 ctgaggaaggaaggggtgtgtgtgttggctgggtatggtggcacacacttttagtcccag 172
Query: 304 cactca 309
||||||
Sbjct: 171 cactca 166
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 710
Length adjustment: 9
Effective length of query: 300
Effective length of database: 701
Effective search space: 210300
Effective search space used: 210300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no191_h12.g1 MSMg01no191_h12.g1 CHROMAT_FILE:
MSMg01no191_h12.g1 PHD_FILE: MSMg01no191_h12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:05 2005
(192 letters)
>mm_chr9_44573082_44573674
Length = 593
Score = 358 bits (185), Expect = e-103
Identities = 191/193 (98%), Gaps = 1/193 (0%)
Strand = Plus / Plus
Query: 1 ttctcttgga-attttgcatttataattcagtaaaaccaaaaaagtttatttctcaaaac 59
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctcttggatattttgcatttataattcagtaaaaccaaaaaagtttatttctcaaaac 260
Query: 60 aatgtttatggacctgtagcttattctgaaatatgttttttaaagatagaaagaaatgga 119
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 aatgtttatggacctgtagcttattctgaaatatgtttttaaaagatagaaagaaatgga 320
Query: 120 tgaatgatttaggtgtgtgataaaataattataatgaaattttaagagaaactagttggt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaatgatttaggtgtgtgataaaataattataatgaaattttaagagaaactagttggt 380
Query: 180 agttacaggactg 192
|||||||||||||
Sbjct: 381 agttacaggactg 393
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 192
Length of database: 593
Length adjustment: 8
Effective length of query: 184
Effective length of database: 585
Effective search space: 107640
Effective search space used: 107640
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
