Query= MSMg01no194_a17.b1 MSMg01no194_a17.b1 CHROMAT_FILE:
MSMg01no194_a17.b1 PHD_FILE: MSMg01no194_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:48 2005
(676 letters)
>mm_chr9_81439700_81440773
Length = 1074
Score = 1201 bits (621), Expect = 0.0
Identities = 658/671 (98%), Gaps = 2/671 (0%)
Strand = Plus / Plus
Query: 6 gaattcaccttgacatggctttctttctgccaatctttaaattgacccagggagccttta 65
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcaccttgacatggatttctttctgccaatctttaaattgacccagggagccttta 265
Query: 66 ttttgtgagacagaatgattcaagtttatgttatttactgcttgcaccctgacactttaa 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ttttgtgagacagaatgattcaagtttatgttatttactgcttgcaccctgacactttaa 325
Query: 126 agataactgtagtgtcacaaatggcttgacctatcaattagtttgtagacagtgtataaa 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 agataactgtagtgtcacaaatggcttgacctatcaattagtttgtagacagtgtataaa 385
Query: 186 gcccagtgaatgtttgaggccagataccatttgcttagaaagtcaatatcaggtctgtat 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gcccagtgaatgtttgaggccagataccatttgcttagaaagtcaatatcaggtctgtat 445
Query: 246 gggatacaggtccatgggtcccagaacaatctatgaaatttgacctcaataaagttcata 305
|| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ggaatataagtccatgggtcccagaacaatctatgaaatttgacctcaataaagttcata 505
Query: 306 aaactactattgtctataaagactagctctcctgacccaatgccatcccagagaaaatgc 365
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aaactactattgtcta--aagactagctctcctgacccaatgccatcccagagaaaatgc 563
Query: 366 tcttcagtgcctcctgtagacaaggttagaatggtaagctcttgtcattctggaagatct 425
||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 564 tcttcagtgtctcctgtagacaaggttagaagggtaagctcttgtcattctggaagatct 623
Query: 426 agtcaagggatgtgtcctgtggccttcctgttaacatgtgtggcaaatgcacttgaccca 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agtcaagggatgtgtcctgtggccttcctgttaacatgtgtggcaaatgcacttgaccca 683
Query: 486 actatcaacatgctaagagtcagcaaacctaaaatcttgctatgttcaccccattttgcc 545
|||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 684 actatcaacatgctgagagtcagcaaacctaaaatcttgctatgttcacctcatttggcc 743
Query: 546 tgtataaagcatcctatttgtgccctaggtcaagccatgtggtctgtttcagcaactagg 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 744 tgtataaagcatcctatttgtgccctaggtcaagccatgtggtctgtttcagcaacttgg 803
Query: 606 atcacatcctaactgctagttcttctcttctctgtggtttcaactataggtcattgtcac 665
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 804 atcacatcctaactgctagttcttctcttctctgtggtttcaactataggtcgttgtcac 863
Query: 666 ctatccttaca 676
|||||||||||
Sbjct: 864 ctatccttaca 874
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1074
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1064
Effective search space: 708624
Effective search space used: 708624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no194_a17.g1 MSMg01no194_a17.g1 CHROMAT_FILE:
MSMg01no194_a17.g1 PHD_FILE: MSMg01no194_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:49 2005
(662 letters)
>mm_chr9_81481440_81482501
Length = 1062
Score = 1195 bits (618), Expect = 0.0
Identities = 651/662 (98%)
Strand = Plus / Minus
Query: 1 actacttctaaagtaagttttgcctttctgccatgaaagacagacttatttagccattgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 actacttctaaagtaagttttgcctttctgccatgaaagacagacttatttagccattgt 803
Query: 61 cacaccggtaaccacctactccttgtcctatattagtgtttacaggtctatcttcttcac 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 cacaccggtaaccacccactccttgtcctatattagtgtttacaggtctatcttcttcac 743
Query: 121 tggttgaccaattaaagagagcaatttggttggtatcagacagcatgcaggataatatgt 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 742 tggttgaccaattaaagagagcaatttggttggtatcagacaccatgcaggataatatgt 683
Query: 181 tttgcctacacaataactggttgtcaaataagctgatcaacatttctagattttatttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tttgcctacacaataactggttgtcaaataagctgatcaacatttctagattttatttct 623
Query: 241 gtcatcacaacacaactgtattatttgaaaatgtctgagtaatcatcttcataaaataag 300
||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gtcatcacaactcaaaggcattatttgaaaatgtctgagtaatcatcttcataaaataag 563
Query: 301 actgggttggcatatttcacttctctcagctcaaaatagattgagacactaagcagaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 actgggttggcatatttcacttctctcagctcaaaatagattgagacactaagcagaaat 503
Query: 361 caatgccagagttatattaaatacattcaattaaagtaaaacaacattaattcatctatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 caatgccagagttatattaaatacattcaattaaagtaaaacaacattaattcatctatt 443
Query: 421 ctttatgaagttggcaaacacgctcttcccacagtgttgaattttggacgtgcatgtagt 480
|||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||
Sbjct: 442 ctttatgaagttggcaaacatgctcttcccacagtgctgaattttggacgtgcatgtggt 383
Query: 481 ttgaatctagaactagtttacagagctggaaggcatgaggcagctccctgtgcagatttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 382 ttgaatctagaactagtttacagagctggaaggcatgaggcagctccctgtgcagttttt 323
Query: 541 ctagatgttctgtctctctaaagttctcaagcgaggaacaaaagtagccttcagggaccc 600
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 322 ctagatgttctgtctctctaaagttctcaagcgaggaacaaaagtagccttctgggaccc 263
Query: 601 atcatggaatagcgatgggctggctgcttgtctgcctatgcaatgctaggatgcttttat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 atcatggaatagcgatgggctggctgcttgtctgcctatgcaatgctaggatgcttttat 203
Query: 661 gg 662
||
Sbjct: 202 gg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space: 685904
Effective search space used: 685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
