Query= MSMg01no195_m21.b1 MSMg01no195_m21.b1 CHROMAT_FILE:
MSMg01no195_m21.b1 PHD_FILE: MSMg01no195_m21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:07 2005
(320 letters)
>mm_chr9_71202988_71203707
Length = 720
Score = 588 bits (304), Expect = e-172
Identities = 313/316 (99%)
Strand = Plus / Plus
Query: 5 gaattcattgagtcttaaggacaaccccaagaggtgatgtactgctttctgtatgcaagg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattgagtcttaaggacaaccccaagaggtgatgtactgctttctgtatgcaagg 264
Query: 65 gatctggtgaaaggctatggttgtcgctggctcagagtacttcctgacaggttagttcac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gatctggtgaaaggctatggttgtcgctggctcagagtacttcctgacaggttagttcac 324
Query: 125 tgaacaggacagagctaaagagttgcttaggaaaaacaaacagtgtccactggcaggaca 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 325 tgaacaggacagagctaaagagttgcttaggaaaaacaaacagtgtccactggcagaaca 384
Query: 185 aagatgtggatctctctgtagcagctcaccctgaaatggcagatgtctggtccgtctgcc 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 385 aagatgtggatctctctgtagcagctcaccctgaaatggcagatgtctggtccggctgcc 444
Query: 245 tccactcccccatccacacctctactgactgcatatttcttcccaggagccttggacctg 304
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 445 tccactcccccatccacacctctactgactgtatatttcttcccaggagccttggacctg 504
Query: 305 actccaggttccctct 320
||||||||||||||||
Sbjct: 505 actccaggttccctct 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no195_m21.g1 MSMg01no195_m21.g1 CHROMAT_FILE:
MSMg01no195_m21.g1 PHD_FILE: MSMg01no195_m21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:08 2005
(292 letters)
>mm_chr9_71258627_71259317
Length = 691
Score = 545 bits (282), Expect = e-160
Identities = 288/290 (99%), Gaps = 1/290 (0%)
Strand = Plus / Minus
Query: 1 ctacagcattcttacattccctcattactggttctctagggaaaacctccaacctttcaa 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 489 ctacagcattcttacattccctcattactgggtctctagggaaaacctccaacctttcaa 430
Query: 61 catcctgggttttcatttccagagatgccaaagatacaattgtggagtccactcaagtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 catcctgggttttcatttccagagatgccaaagatacaattgtggagtccactcaagtag 370
Query: 121 ttcttgaaaaatgaaagctcattttttaaaaaaaagcattgctctgcagtgacaaatttc 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ttcttgaaaaatgaaagctca-tttttaaaaaaaagcattgctctgcagtgacaaatttc 311
Query: 181 acaattatctgtctttccatatgtctcttttaagcttgccaccaagcagtttcctttcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 acaattatctgtctttccatatgtctcttttaagcttgccaccaagcagtttcctttcaa 251
Query: 241 gtgcccatgagtgatcatttttcaacttgtcttaggctaccatgaagaaa 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gtgcccatgagtgatcatttttcaacttgtcttaggctaccatgaagaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 691
Length adjustment: 9
Effective length of query: 283
Effective length of database: 682
Effective search space: 193006
Effective search space used: 193006
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
