CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCAGGATATCCAGAGCTACATAGTGAGACCCTGTCTCAAAACAACA
TCAGCAGCAAGAACTACAACAAAAGAAAATAAACTGATCATTAGTTCTTT
ATTAGTATATTGAAGTAGCAACTTGAGTCTAATGAGTGTTTTTCTTCTAG
GATCAGCCTTTACAACATCTGACAATTTGTCTCTCAGTTCCTGGGTATCG
TCATCTTCCAGTTTTCCTGGATTTCAGCATCCACAGCCCCTGACTGCTCT
TGGTACCAGTACAGCATCCATAGCGACACCGATTCCTCACCCTATACAGG
GTTCTCTGCCACCATATAGCCGCCTGGGAATGCCTCTGACCCCATCTGCA
ATAGCCAGCTCCACGCACGGAAGTGGTCCCACGTTCCCTTCATTCCACAT
GCCTAGATACCATCACTACTTCCAGCAGGGGCCCTACGCTGCCATCCAAG
GACTTCGCCACTCCTCCGCTGTGATGACGCCATTTGTATGATTCCACTGA
GAGTCGGGGAAGCTAGATACAGAGTGTGCAAATGGCTATGAAAATACAGG
AGGTTTGGCAAGTATTTATGATTCTATTACTCTCCTCATCTTTAACACCA
TTACGAATTTTCCAATTTATATCAAACACCCATTCCCCTCTTATTCATTT
CCTTTATTTCTGCTCCTCCCCCATTTTATTTTTCTTTTTTT

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGATGGACCTACCAGATATCTACA
GAACACTTTACCAACACACGAAAGAATATATGTTTTTCTCAGAACTTCTT
GGAACAGTCTCAAAAACTGACCACATACTCAGTCACAAAGAAAGTCTCAA
AACATAAGAAAATTGAAATAACTTCTTGTACTGGCTGGTTTTGTGTCAAC
TTGACACATGCTGGAGTTATCACGGAGAAAGGAGCTTCAGTTGGGGAAAT
GCCTCCATGAGATCCAGCTGTAAGGCATTTTCTCAATTAGTGATCATGGG
GGAAAGGCCGTTTGTGTGCGGCGCCACCTCTGGGCTGGCAGTCTTGGTTC
TATAAGAGAGGACCCCCCCCCAACACAAAAAAACCAAGTCCGTTTGGCAC
GCCCCTTTATGTTCCCTGATATTACTTCCTATTTTCTGATCTGTTTCCCT
TTCTGTTTTGCCTTCTTTGCCGTATCCCCTTCCTATCTTTTTACTTCTAT
CTTTACCACCACCCACTTTCTCTCAAATTGCATATTATATATTCCCTTCT
TTCTTTGCCACCTCTTATTTATTTCACCTACTTCCTTCTTTTTCCTTCCC
TCATCTCTTCCATTAGTCTTGTTCCTCTTTTCCCCTCATTCCCCTTCCCC
TCTCTCTATCTACCATGCCCCCTATCTTTTCCCTGTTTTTCCTTTAC

Query= MSMg01no196_a06.b1 MSMg01no196_a06.b1 CHROMAT_FILE:
MSMg01no196_a06.b1 PHD_FILE: MSMg01no196_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:25 2005
         (532 letters)



>mm_chr9_24529605_24530536
          Length = 932

 Score =  998 bits (516), Expect = 0.0
 Identities = 525/528 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccaggatatccagagctacatagtgagaccctgtctcaaaacaacatcagcagca 64
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 gaattccaggatagccagagctacatagtgagaccctgtctcaaaacaacatcagcagca 724

                                                                       
Query: 65  agaactacaacaaaagaaaataaactgatcattagttctttattagtatattgaagtagc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 agaactacaacaaaagaaaataaactgatcattagttctttattagtatattgaagtagc 664

                                                                       
Query: 125 aacttgagtctaatgagtgtttttcttctaggatcagcctttacaacatctgacaatttg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 aacttgagtctaatgagtgtttttcttctaggatcagcctttacaacatctgacaatttg 604

                                                                       
Query: 185 tctctcagttcctgggtatcgtcatcttccagttttcctggatttcagcatccacagccc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tctctcagttcctgggtatcgtcatcttccagttttcctggatttcagcatccacagccc 544

                                                                       
Query: 245 ctgactgctcttggtaccagtacagcatccatagcgacaccgattcctcaccctatacag 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ctgactgctcttggtaccagtacagcatccatagcgacaccgattcctcaccctatacag 484

                                                                       
Query: 305 ggttctctgccaccatatagccgcctgggaatgcctctgaccccatctgcaatagccagc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ggttctctgccaccatatagccgcctgggaatgcctctgaccccatctgcaatagccagc 424

                                                                       
Query: 365 tccacgcacggaagtggtcccacgttcccttcattccacatgcctagataccatcactac 424
           |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tccatgcagggaagtggtcccacgttcccttcattccacatgcctagataccatcactac 364

                                                                       
Query: 425 ttccagcaggggccctacgctgccatccaaggacttcgccactcctccgctgtgatgacg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ttccagcaggggccctacgctgccatccaaggacttcgccactcctccgctgtgatgacg 304

                                                           
Query: 485 ccatttgtatgattccactgagagtcggggaagctagatacagagtgt 532
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ccatttgtatgattccactgagagtcggggaagctagatacagagtgt 256


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 932
Length adjustment: 10
Effective length of query: 522
Effective length of database: 922
Effective search space:   481284
Effective search space used:   481284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)