TTTTCNNNNNNAAAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXCGCGGAATTCAATTCTCAGCAACCACATGGTGACTCACAA
CTGTCTGTAATTAGAAATGTCCTCTTCTGGTGTGTCCAAAGACAGCTTCA
CTGTACTCATATAACATTAGTTAAACAAACAAACAAACAAACAAACAAAC
AAACAAACAAACAGATTCAGTCTCGGATTAAAGTAGAAGGTTCAGCTATG
CAAAGCCTATGTGATAATGCAGTGATCAATCTGACTTGGTATGTCTATAT
TACATTCTCTCTTCCCAGTGCTCAGGGAACATTTCATAAGAGAGGGCAGA
AAGGTTGCAAAGGCCAGAGATTGATAATTACCCCCGCCCCCCACTATATG
AACATGACATAGCTGCTGCATTCACGAATTCATAAAAAATGAGAACAACT
GCCCATGACCTGTACAAGATCAAGCCAGTCAACACTCATACAGCTGTGGA
GGAGGGACTCACAGGTCCGACCTCTAGGTGAGAAGCTATTGGCTGTTGCT
AGCTGCTAGGAGAGATAGAGAGTCAAATTTCTTCAAGACTATGATGCTAA
TAGGTCTCTCATGCTCTAATGGTTGGCCCCTAACCCTTGCATATAANAGC
CATACCAATTGAACTCAGTGGCCTTTAAAAGGACAAAATAAAGAGACATG
AAATTGAAAGGGATGTAGAGG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTAAAGACTAAGCCACCAACTAAA
GGGCATACATGGGCTGATCCACGGCTCCTGGCACGTATATAGCTGAAGAC
TGACTGCCTTGTTTGGCCCCAGGATGTGCCAAATCCTATAGAGACTTTAT
GCCCCAGAGAAGGGGGATGCCCAGGAAGGGGGCATCCTCTCAGAGGAGAA
GAGGGAGGCATAAGGTGAAGAACTCTGGCATGTAAATAAATAAAATAATT
AATTAAAAATAATAAAAGAAAGAAAACAAAATTTAAAAGAAATTGAAAGT
ACATGAGGTGAAAAAACTATTAAATTATATCTTCAATAATAGTAGGTTGA
AAAGAATTCCTGGACATTTTGGTGTATCAAAACCCCAGAAAGAGCACAGC
TCTTCAGTATTAGCAGCTGTAGAGTACTAATGGTGAGCCATGGAAGTTTC
CTATGCATCTCAGAACTCAGTACACACAAACAAAAGTCCACTACCATAAG
TGAGGTGCTCATAAACACTAAGTAGAAATGTGTTCAAATAGTTCAATGAA
AGCTGAAAAATCTGCCTATATTCCAGTGCTCANAGTCACTAGGACACCAC
TATAGAGGGTTGGCTGTTTTACATGGGAGGGGGGCCAGTTTGTCCAGTAT
TTGATTG

Query= MSMg01no196_l14.g1 MSMg01no196_l14.g1 CHROMAT_FILE:
MSMg01no196_l14.g1 PHD_FILE: MSMg01no196_l14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:16:22 2005
         (604 letters)



>mm_chr9_82390378_82391382
          Length = 1005

 Score = 1110 bits (574), Expect = 0.0
 Identities = 597/605 (98%), Gaps = 1/605 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctaaagactaagccaccaactaaagggcatacatgggctgatccacggctcctggcacgt 60
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 ctaaagactaagccaccaactaaagggcatacatgggctgagccacggctcctggcacgt 260

                                                                       
Query: 61  atatagctgaagactgactgccttgtttggccccaggatgtgccaaatcctatagagact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atatagctgaagactgactgccttgtttggccccaggatgtgccaaatcctatagagact 320

                                                                       
Query: 121 ttatgccccagagaagggggatgcccaggaagggggcatcctctcagaggagaagaggga 180
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 ttatgccccagagaagggggatgcccaggaagggggcatcctctcaggggagaagaggga 380

                                                                       
Query: 181 ggcataaggtgaagaactctggcatgtaaataaataaaataattaattaaaaataataaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcataaggtgaagaactctggcatgtaaataaataaaataattaattaaaaataataaa 440

                                                                       
Query: 241 agaaagaaaacaaaatttaaaagaaattgaaagtacatgaggtgaaaaaactattaaatt 300
           | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 441 ataaagaaaacaaaatttaaaagaaattgaaagtacacgaggtgaaaaaactattaaatt 500

                                                                       
Query: 301 atatcttcaataatagtaggttgaaaagaattcctggacattttggtgtatcaaaacccc 360
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 501 atatcttcaataatagtaggttgaaaagaattcctagacattttggtgtatcaaaacccc 560

                                                                       
Query: 361 agaaagagcacagctcttcagtattagcagctgtagagtactaatggtgagccatggaag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaaagagcacagctcttcagtattagcagctgtagagtactaatggtgagccatggaag 620

                                                                       
Query: 421 tttcctatgcatctcagaactcagtacacacaaacaaaagtccactaccataagtgaggt 480
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 621 tttcctatgcatctcagaactcagtacacacaaacaaatgtccactaccataagtgaggt 680

                                                                       
Query: 481 gctcataaacactaagtagaaatgtgttcaaatagttcaatgaaagctgaaaaatctgcc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gctcataaacactaagtagaaatgtgttcaaatagttcaatgaaagctgaaaaatctgcc 740

                                                                       
Query: 541 tatatt-ccagtgctcanagtcactaggacaccactatagagggttggctgttttacatg 599
           |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tatatttccagtgctcaaagtcactaggacaccactatagagggttggctgttttacatg 800

                
Query: 600 ggagg 604
           |||||
Sbjct: 801 ggagg 805


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1005
Length adjustment: 10
Effective length of query: 594
Effective length of database: 995
Effective search space:   591030
Effective search space used:   591030
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)