Query= MSMg01no199_g22.b1 MSMg01no199_g22.b1 CHROMAT_FILE:
MSMg01no199_g22.b1 PHD_FILE: MSMg01no199_g22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:19:59 2005
(641 letters)
>mm_chr9_25517394_25518434
Length = 1041
Score = 611 bits (316), Expect = e-179
Identities = 334/340 (98%)
Strand = Plus / Minus
Query: 302 agagtaacaatgtagtatgtctctctgagagctagaaggaagaataataaatattgaata 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 agagtaacaatgtagtatgtctctctgagagctagaaggaagaataataaatattgaata 982
Query: 362 ttttaccatgaacaaactgataagtgattgacaagatgtataactgtgtgttggtttgaa 421
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 981 ttttaccatgaataaactgataggtgattgacaagatgtataactgtgtgttggtttgaa 922
Query: 422 cattttacatacatatagatcacatattatctcatggctacctgcaatcatttacattcc 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 cattttacatacatatagatcacatattatctcatggctacctgcaatcatttacattcc 862
Query: 482 aggtgtcagttaaaataaaatacagtacagttataaataacagaaagaatggtgatattc 541
|| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 861 agatgtcagttaaaataaaatacagtacagttataaataacagaaagaatggtggtattc 802
Query: 542 ctttctcatttccttgtcttcggcttgtgcagctgagctctacatatctttcctattgga 601
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctttctcatttccttgtcttcggtttgtgcagctgagctctacatatctttcctattgga 742
Query: 602 gtactcttgaatataatcttccttgcttgctttcttgtcc 641
|||||||||||||||||||||||||| |||||||||||||
Sbjct: 741 gtactcttgaatataatcttccttgcctgctttcttgtcc 702
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space: 650561
Effective search space used: 650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no199_g22.g1 MSMg01no199_g22.g1 CHROMAT_FILE:
MSMg01no199_g22.g1 PHD_FILE: MSMg01no199_g22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:19:59 2005
(595 letters)
>mm_chr9_25464454_25465448
Length = 995
Score = 1021 bits (528), Expect = 0.0
Identities = 580/600 (96%), Gaps = 5/600 (0%)
Strand = Plus / Plus
Query: 1 gaagaggagtgtttccaggaaggtgttgcaggtggtggacattcagtggacatttgctta 60
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 201 gaagaggagtgtttccaggaacgtgttgcaggtggtggacattcagtggacatttgatta 260
Query: 61 ttccttggtcacgtgacatatgaagacttagaggatatcagtgggacacacatctctttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttccttggtcacgtgacatatgaagacttagaggatatcagtgggacacacatctctttg 320
Query: 121 acctgcccacacacacttggctaattagaatccctcaagctctgtttttggattcaattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 321 acctgcccacacacacttggctaattagaatccctcaagctctgtttttgggttcacttt 380
Query: 181 tcttgtttcgtttctgacaaatggagcacagttgattttgtgccctcattcatttgatat 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 tcttgtttcgtttctgacaaatggagcacagttgattttgtgcactcattcatttgatat 440
Query: 241 tatactagagtgagagatggtcttttgaagtggagacttctggtttctttggaaagtcag 300
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tataccagagtgggagatggtcttttgaagtggagacttctggtttctttggaaagtcag 500
Query: 301 ttatattaaatgatgttttgctggggcacacaagcaaaaggatgttccactatggcagag 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 ttatattaaatgatgttttgctggggcacacaagcaaaaggatgttctactatggcagag 560
Query: 361 atgtgaaaggacatgtgatatttagaaaggatataactatgaccccacagagagtgggca 420
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 561 atgtgaaaggacatgtgatatttagaaaggatataactatgaccccacagacagtgggca 620
Query: 421 cttgagaattggcttgccttgttctgctgtgatattcttttctgatgagacacat----- 475
||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 621 tttgagaattggtttgccttgttctgccgtgatattcttttctgatgagacacatatatt 680
Query: 476 ggttcaccttatactgcattgctgagctctgctggtggtgactttgtagagagaaaccaa 535
|||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 681 ggttcaccttatactgcattgctgagctttgctggtggtgacttcgtagagagaaaccaa 740
Query: 536 agaacttcttgtcagatacctgtgacttcttgccatttctgtggacttgagctggttggt 595
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 741 agaacttcttgtcagatacctgtgacttcttgccatttgtgtggacttgagctggttggt 800
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space: 576225
Effective search space used: 576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
