Query= MSMg01no204_e05.b1 MSMg01no204_e05.b1 CHROMAT_FILE:
MSMg01no204_e05.b1 PHD_FILE: MSMg01no204_e05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:25:44 2005
(645 letters)
>mm_chr9_76314533_76315576
Length = 1044
Score = 1019 bits (527), Expect = 0.0
Identities = 612/645 (94%), Gaps = 14/645 (2%)
Strand = Plus / Plus
Query: 5 gaattcagagaaacgatccaaggttccaacagcataggtttcttgcaaggtttaaatttc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagagaaacgatccaaggttccaacagcataggtttcttgcaaggtttaaatttc 264
Query: 65 ctcttaacaaagcagccaggcatttgctgctttacattcataacatcttccacggatttc 124
||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 265 ctcttaacaaaacagcctggcatttgctgctttacattcataacatcttccacagatttc 324
Query: 125 tggtcagctgtaacctgcatggctcacgtgctgcacaaagatatgaccaagaatttacct 184
||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 325 tggtcagctgtaacctgcatggctcacgtgctgtacaaagatacgaccaagaatttacct 384
Query: 185 gtagataaacgagaaagctgaaatggccagaaatacaaatctaccccaaccacgagaagg 244
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtagataaaggagaaagctgaaatggccagaaatacaaatctaccccaaccacgagaagg 444
Query: 245 tctgcatttctgaacaggttaga-tggactggacatgctacccacacagagaccaggact 303
||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 445 tctgcatttttgaacaggtt-gaatggactggacatgctacccacacagagaccaggact 503
Query: 304 tcctaagaaacacattcacgttggacacatctagttgtgatcagtttaagacagatgtgt 363
|||||||||||||||| |||||||| ||||||||||||||||||| ||||| ||||||||
Sbjct: 504 tcctaagaaacacatttacgttggagacatctagttgtgatcagtgtaagatagatgtgt 563
Query: 364 gcagtctgtcctgctagcacattgtatactaggaacataggtgaatgtactgtaggcatg 423
||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||
Sbjct: 564 gcagtctgtcctgctagcacattgtatgctaggaacagaggtgaatgtactgtaggcgtg 623
Query: 424 gccttagaggctcctgagatatgaactccataggaaacaagtctcaacctggacacctgg 483
| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 624 ggcttagaggctcctgagatatgaactccataggaaacaaggctcaacctggacacctgg 683
Query: 484 catttattggcttacttactatttgaaataaatat--gagagtaaatgctgtttttcagt 541
||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 684 catttattggcttacttaccatttgaaataaatataagagagtaaatgctgtttttcagt 743
Query: 542 tcctgtggctaaatgcagcacgtaggttatgttttgaatgataacattttattgcagtgt 601
|||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 744 tcctgtggctaaatgcagcacgtaggttatgttttgaatg-t--cattttattgcagtgt 800
Query: 602 tgtacatt-gttttgtattctaatgtcttatttatttaaacctaa 645
|||||||| | | | |||||||||||||||||||||||||
Sbjct: 801 tgtacattag------aatataatgtcttatttatttaaacctaa 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1044
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1034
Effective search space: 656590
Effective search space used: 656590
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no204_e05.g1 MSMg01no204_e05.g1 CHROMAT_FILE:
MSMg01no204_e05.g1 PHD_FILE: MSMg01no204_e05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:25:44 2005
(647 letters)
>mm_chr9_76388316_76389362
Length = 1047
Score = 1220 bits (631), Expect = 0.0
Identities = 643/647 (99%)
Strand = Plus / Minus
Query: 1 ttactcctcagaatatggaatcagaaagactcatgagcagaagtatatagtttgaattag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 ttactcctcagaatatggaatcagaaagactcatgagcagaagtatatagtttgaattag 788
Query: 61 ggtggagtcatttctgtggcagcacaccactgacattcaggtaccagctccaccctgaat 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 787 ggtggagtcatttctgtggcagcacaccgctgacattcaggtaccagctccaccctgaat 728
Query: 121 agtcactgttcctgggaatgtttgtttagtctccttggttgttagtaatacagaagaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 agtcactgttcctgggaatgtttgtttagtctccttggttgttagtaatacagaagaata 668
Query: 181 ttgcccatcagtgggccccatgaatgtcaaagggaaggtgagcagatgatgggtactctt 240
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct: 667 ttgcccatcagtgggccccatgaatgccaaagggaaggtgagcagatgatgggtactcat 608
Query: 241 cctgggaatcagctggttgtgtaaaattagtgctaaatcagtatcttcagttattttata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 cctgggaatcagctggttgtgtaaaattagtgctaaatcagtatcttcagttattttata 548
Query: 301 aaggatatgaagcaaaatccttttggtgcctttttcctttcctttggtccagtattcctt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 547 aaggatatgaagcaaaatccttttggtgcctttttcctttcctttggtccagtactcctt 488
Query: 361 tctaaacctcctacagttctcagcagctcacactttatacaatgtatcattctcttggca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tctaaacctcctacagttctcagcagctcacactttatacaatgtatcattctcttggca 428
Query: 421 gagttactgtctgatgtgaatgagccagcgtcattgtgccacagagtcactccccgatgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gagttactgtctgatgtgaatgagccagcgtcattgtgccacagagtcactccccgatgc 368
Query: 481 atcaccatgcaaacatgtctgtctagctaagagatacttaagtattcgtcagcactgtca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 atcaccatgcaaacatgtctgtctagctaagagatacttaagtattcgtcagcactgtca 308
Query: 541 ttacattagaatcatctctctcctaatgatctcagcctttgtaaagaatttcctctctat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ttacattagaatcatctctctcctaatgatctcagcctttgtaaagaatttcctctctat 248
Query: 601 ctcatctctgctctgactctcagtgtgaattcttccgttgaatttga 647
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ctcatctctgctctgactctcagtgtgaattcttccgttgaatttga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
