CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTGTTCAGCTCTGAGCCCTATTTTTTAATGGGGTTATTTGATTT
TCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCCCC
TATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTT
TTTGTCTTGTTGATGGTGTCTTTTGCCTTGCAGAAGCTTTGCAACTTTAT
GAGGTCCTATTTATTGATTCTAGATCTTACAGTATGAACCATTGCTGTTC
TATTCAGGAACTTTTCCCCTGTGCCCATATCTTCGAGGCTTTTCCCTACT
TTCTCCTCTATAAGTTTCACCCGCCTCTGGTTTTATGTGGAGTTCCTGAA
TCCACATAGATTTGACCTTAATACAAGGAGATAGGAATGGATCAATTTGC
ATTCTTCTACCTGATAACCGCCAGTTGTGCCAGCACCATTTGTTGAAAAT
ACTGTCTTTTTTCCACTGGATGGTTTTAGCTCCCTTGTCAAAGATCAAGT
GACCATAAGTGTGTGGGTTCATCGCTGGGCCTTCAATTCTGTTCCATTGG
TCTAATTGTCTGTCACTATACCAGTATCATGCAGTTTTGATCACAATTGC
TCTGTATTATCGCTTTAGGTCATGCTTGATGTTCTCGTTTACGTTTCTTT
TTCCTTGAGAAAN

TCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTCAGATTCAGGTGGGGCTCAAATC
CTTATTTTCTGAAGTATTTTATTCTAGAATAGAACCGACAAAGAAAGAGG
TTTTATGTTTGGCCTTTTAGTCTCTTTGAAACTCTATTTCTCTTGGAGAT
TTCTGTTTTAGTTAGACTTAACACATGTTCTTTGCTTTATAATCTGAAGT
GATTCTTTCTTCTGGTTCTTATATAGCCCATGAACAACAATGTTCCAGGA
CAAATTTAGCTTTGTGTGTGTCTAAGACTGGGTCGTCTGTTCCAGGCAAT
TGTGTACAGACTTCCATGATGTTGGACATCTCTGTGAATGACAGCTAATG
ATTGGTTCTGATAGGTCTACTCATTGCTTGATGGACCAGAGCTGTTGGGG
CTAATGGTCATCTCCTGCTAGGCCTCATGGAGAGTTTTAAAGTTCCACCC
AAAAGAAGAACATCCCTTCATCAATTTTATATCATCTGCATTTCTTTCTT
TCTTCTTTCTCTCTTTCATTCTTTCTTCCCTCCTTTCTTCTTTTCTACCT
TTTCACATTACACCCCAGTTGCAGACTCCTTTCTCCCCTCCTCCCAGTCC
CACCCTTACAAGTCATTACTCCCATCTCTTCTCCTAGAAAAAAGGAACCA
CCCCACCCTGGTACATC

Query= MSMg01no204_e09.g1 MSMg01no204_e09.g1 CHROMAT_FILE:
MSMg01no204_e09.g1 PHD_FILE: MSMg01no204_e09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:25:45 2005
         (642 letters)



>mm_chr9_33148329_33149370
          Length = 1042

 Score = 1222 bits (632), Expect = 0.0
 Identities = 641/646 (99%), Gaps = 4/646 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctcagattcaggtggggctcaaatccttattttctgaagtattttattctagaatagaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ctcagattcaggtggggctcaaatccttattttctgaagtattttattctagaatagaac 606

                                                                       
Query: 61  cgacaaagaaagaggttttatgtttggccttttagtctctttgaaactctatttctcttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 cgacaaagaaagaggttttatgtttggccttttagtctctttgaaactctatttctcttg 546

                                                                       
Query: 121 gagatttctgttttagttagacttaacacatgttctttgctttataatctgaagtgattc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gagatttctgttttagttagacttaacacatgttctttgctttataatctgaagtgattc 486

                                                                       
Query: 181 tttcttctggttcttatatagcccatgaacaacaatgttccaggacaaatttagctttgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tttcttctggttcttatatagcccatgaacaacaatgttccaggacaaatttagctttgt 426

                                                                       
Query: 241 gtgtgtctaagactgggtcgtctgttccaggcaattgtgtacagacttccatgatgttgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gtgtgtctaagactgggtcgtctgttccaggcaattgtgtacagacttccatgatgttgg 366

                                                                       
Query: 301 acatctctgtgaatgacagctaatgattggttctgataggtctactcattgcttgatgga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 acatctctgtgaatgacagctaatgattggttctgataggtctactcattgcttgatgga 306

                                                                       
Query: 361 ccagagctgttggggctaatggtcatctcctgctaggcctcatggagagttttaaagttc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ccagagctgttggggctaatggtcatctcctgctaggcctcatggagagttttaaagttc 246

                                                                       
Query: 421 cacccaaaagaagaacatcccttcatcaattttatatcatctgcatttctttctttcttc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 cacccaaaagaagaacatcccttcatcaattttatatcatctgcatttctttctttcttc 186

                                                                       
Query: 481 tttctctctttcattctttctt----ccctcctttcttcttttctaccttttcacattac 536
           ||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||
Sbjct: 185 tttctctctttcattctttctttcttccctcctttcttcttttctaccttttcacattac 126

                                                                       
Query: 537 accccagttgcagactcctttctcccctcctcccagtcccacccttacaagtcattactc 596
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 accccagttgcagactcctttctcccctcctcccagtcccacccttacaagtcattactc 66

                                                         
Query: 597 ccatctcttctcctagaaaaaaggaaccaccccaccctggtacatc 642
           |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 65  ccatctcttctcctagaaaaaagggaccaccccaccctggtacatc 20


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space:   652224
Effective search space used:   652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)