Query= MSMg01no209_o06.b1 MSMg01no209_o06.b1 CHROMAT_FILE:
MSMg01no209_o06.b1 PHD_FILE: MSMg01no209_o06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:34:11 2005
(631 letters)
>mm_chr9_99579288_99580320
Length = 1033
Score = 913 bits (472), Expect = 0.0
Identities = 538/568 (94%), Gaps = 18/568 (3%)
Strand = Plus / Minus
Query: 68 taaacatgttttaaatcacagggaatatcagctgtgtcctcaggaggccttgcaggccca 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1033 taaacatgttttaaatcacagggaatatcagctgtgtcctcaggaggccttgcaggccca 974
Query: 128 gagtaagtgaacaactctaagtatgaactcctgcaggttgcattctgcccttgaaacata 187
|||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 973 gagtaagtgaacaactctaagtatgaactcctgcaggttgtattctgccctggaaacata 914
Query: 188 tcttaaatgtgacttttttttt-aaaagattacaggcacttacaaataagaatgttgaca 246
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 913 tcttaaatgtgacttttttttttaaaagattacaggcacttacaaataagaatgttgaca 854
Query: 247 ctgtatgcagataatcaaaattgatgccccaggttagagaactgaaggttggtgacgcct 306
|||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 853 ctgtatgcagataatcaaaatt-------------agagaactgaaggttggtgacgcct 807
Query: 307 gtgagaatggagcttcgctttctgacggacagaaaaagcccagatggtatcatagcccca 366
|||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 806 gtgagaatggagcttctttttctgacggacaggaaaagcccagatggtatcatagcccca 747
Query: 367 cccc-agcccaccccgaccccactccgtgacaggaacataaaggggcagatttaccaggc 425
|||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 746 cccccagcccaccccgaccccactccatgacaggaacataaaggggcagatttaccaggc 687
Query: 426 cgagagcacaggctgtgaaccctaaaatgctgtaagatgtccatttggggtaagtgacct 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tgagagcacaggctgtgaaccctaaaatgctgtaagatgtccatttggggtaagtgaccc 627
Query: 486 actctgctttttt-catagtaaacttggggatctgcccactatcacaggtgaacccaagc 544
||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 626 actctgcttttttacatagtaaactcggggatctgcccactatcacgggtgaacccaagc 567
Query: 545 aaccatccccatatactgctcacagaattcacccatactgcagcactc-agtggcagagg 603
|||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 566 aaccatccccatatactgctcacagaattcacccatgctgcagca-tccagtggcagagg 508
Query: 604 gcactgtacactctgggcctcctagagc 631
||||||| ||||||||||||||||||||
Sbjct: 507 gcactgttcactctgggcctcctagagc 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1033
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1023
Effective search space: 635283
Effective search space used: 635283
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no209_o06.g1 MSMg01no209_o06.g1 CHROMAT_FILE:
MSMg01no209_o06.g1 PHD_FILE: MSMg01no209_o06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:34:11 2005
(238 letters)
>mm_chr9_99532964_99533601
Length = 638
Score = 416 bits (215), Expect = e-121
Identities = 233/239 (97%), Gaps = 2/239 (0%)
Strand = Plus / Plus
Query: 1 tcaggtatttacacaatgaaacaatcttgtatcattcctacaccccctctgccattgttg 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 tcaggtatttacacaatgaaacaatcttgtatcattcctacaccacctctgccattgttg 260
Query: 61 ggagggcggtcagtatgactgggatttgtggagtcagacagaaatagcatcttttaattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggagggcggtcagtatgactgggatttgtggagtcagacagaaatagcatcttttaattc 320
Query: 121 tggtgctgcctggtgtagtggc-acacgcctttaatcccagcacttgggaggcagaggca 179
|||||||||||||||| ||||| | | |||||||||||||||||||||||||||||||||
Sbjct: 321 tggtgctgcctggtgtggtggcga-atgcctttaatcccagcacttgggaggcagaggca 379
Query: 180 ggtggatttctgagttcgaggccagcctggtctacaaagtgagttccaggacagccaga 238
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gttggatttctgagttcgaggccagcctggtctacaaagtgagttccaggacagccaga 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
