Query= MSMg01no211_j05.b1 MSMg01no211_j05.b1 CHROMAT_FILE:
MSMg01no211_j05.b1 PHD_FILE: MSMg01no211_j05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:36:51 2005
(210 letters)
>mm_chr9_113290138_113290747
Length = 610
Score = 373 bits (193), Expect = e-108
Identities = 205/209 (98%)
Strand = Plus / Minus
Query: 1 aatatcaatagtgattactctagctgcctggatgacaaatgagtttttaattctttaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatatcaatagtgattactctagctgcctggatgacaaatgagtttttaattctttaggt 326
Query: 61 tctttctcacagacacgcattatattataatgggaagatgcgctggaaatgatatcattt 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctttctcacagacacacattatattataatgggaagatgcgctggaaatgatatcattt 266
Query: 121 aaaaatatatttttcttattcatgaggagggcaattctttcctctaggaaggcaactgag 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaaaatatatttttcttgttcatgaggagggcaattctttcctctaggaaggcaactgag 206
Query: 181 aacgcttcctcctcctcctcttcctcctc 209
||||| |||||||||||||| ||||||||
Sbjct: 205 aacgcctcctcctcctcctcctcctcctc 177
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 210
Length of database: 610
Length adjustment: 9
Effective length of query: 201
Effective length of database: 601
Effective search space: 120801
Effective search space used: 120801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no211_j05.g1 MSMg01no211_j05.g1 CHROMAT_FILE:
MSMg01no211_j05.g1 PHD_FILE: MSMg01no211_j05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:36:51 2005
(288 letters)
>mm_chr9_113151192_113151879
Length = 688
Score = 482 bits (249), Expect = e-140
Identities = 279/289 (96%), Gaps = 2/289 (0%)
Strand = Plus / Plus
Query: 1 tttagtcagattacatggcaaagtggtcagaatctccctcccctatctgacacagttaac 60
||||||||||||||||||| ||||||||||||||||||||| |||||||| || ||||||
Sbjct: 201 tttagtcagattacatggcgaagtggtcagaatctccctcctctatctgagaccgttaac 260
Query: 61 aacactgctttcattactttcaatgtcaccactctgacatcagcaggtatggcataccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacactgctttcattactttcaatgtcaccactctgacatcagcaggtatggcataccaa 320
Query: 121 atagatgtgatgcctcttttcagatggttgctttgggtgtccctctcagttttgcctagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atagatgtgatgcctcttttcagatggttgctttgggtgtccctctcagttttgcctagc 380
Query: 181 tctggaatggagcagcccttttat-cgaagagagcagagtttcaagatgtgttgtatggc 239
||||||||||||||||||||| || |||||||||| ||||| ||||||||||||||||||
Sbjct: 381 tctggaatggagcagcccttt-attcgaagagagcggagttccaagatgtgttgtatggc 439
Query: 240 acgcaagcttccaagaagctccttggtgttaccaccctcctcagcctgg 288
| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gcacaagcttccaagaagctccttggtgttaccaccctcctcagcctgg 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
