Query= MSMg01no213_g09.b1 MSMg01no213_g09.b1 CHROMAT_FILE:
MSMg01no213_g09.b1 PHD_FILE: MSMg01no213_g09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:24 2005
(237 letters)
>mm_chr9_77903565_77904202
Length = 638
Score = 420 bits (217), Expect = e-122
Identities = 223/225 (99%), Gaps = 1/225 (0%)
Strand = Plus / Plus
Query: 11 gttttgttttgttttgtttttagtaacatcttatcttttaccagatttgcttaaagtgtc 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gttttgttttgttttgtttttagtaacatcttatcttttaccagatttgcttaaagtgtc 270
Query: 71 tgtgtgaaaagccaggtatggtgtggtattcctgtgactctggcataaggccagccttag 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tgtgtgaaaagccaggtatggtgtggtattcctgtgactctggcataaggccagccttag 330
Query: 131 cgccattgtgattctttcccttggactacatgaggccttgttgatttt-gtgtgtgtgtt 189
|||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 331 cgccattgtgattctttcccttggactagatgaggccttgttgatttttgtgtgtgtgtt 390
Query: 190 tgatgtccttgttctatttggagacacttcatggaaaggattaat 234
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tgatgtccttgttctatttggagacacttcatggaaaggattaat 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 638
Length adjustment: 9
Effective length of query: 228
Effective length of database: 629
Effective search space: 143412
Effective search space used: 143412
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no213_g09.g1 MSMg01no213_g09.g1 CHROMAT_FILE:
MSMg01no213_g09.g1 PHD_FILE: MSMg01no213_g09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:25 2005
(290 letters)
>mm_chr9_77969165_77969855
Length = 691
Score = 499 bits (258), Expect = e-146
Identities = 282/290 (97%), Gaps = 1/290 (0%)
Strand = Plus / Minus
Query: 1 ttcccctgtatacactttagcgaacaaatcttacaagcatttggtctcttggacgacttg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 490 ttcccctgtatacactttagcgaacaaatcttacaagcatttggtctcttggacaacttg 431
Query: 61 gttttcctgaattaggaacagcagctaggagcccagaagacccttctctacagagaatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gttttcctgaattaggaacagcagctaggagcccagaagacccttctctacagagaatct 371
Query: 121 ggcttggctgtagcacgacaaaggagcgcactgaatatgccttcagccactgcactgagg 180
|||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 370 ggcttggctgtagcaccaaaaaggagcgcattgaatatgccttcagccactgcactgagg 311
Query: 181 gcacagagaggaggaaatcttctacg-ccagtaactgttccctgatttccaccttggcat 239
|||||||||||||||||||||||||| |||| ||||||| |||||| |||||||||||||
Sbjct: 310 gcacagagaggaggaaatcttctacgcccaggaactgtttcctgatctccaccttggcat 251
Query: 240 tattgactgttctcattgctgagacaacgccccactaaagcaacaaaagc 289
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tattgactgttctcattgctgagacaacgccccactaaagcaacaaaagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 691
Length adjustment: 9
Effective length of query: 281
Effective length of database: 682
Effective search space: 191642
Effective search space used: 191642
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
