TTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTCATATAAAAACAAATACATACATCTTATCGTATGCAAGTTT
GCTTTTGTCTTTAATAAATGACAAAATTATCTATATATTGAAGACTTATT
TTGAAATGGACTTCTTTATGCCACATTGTCAGTAAGTACTTGATTTGCGT
ACTTATTTCATATACCTACACACTTGGGGCTGTGTAAAAATGTCTCTGGG
GGTGGCTCAGGGGGCAAATGGGGAAAGTTAGCTCACAGGAATGCCACTGG
TCTGCCCTGAGGGACCTAGCAACTGCTTATGTCATCACCTGCTGCTGCTG
CACTGGTGTGTGCTGTTTATTAAACGCACCACCCCAGCTCTCTCTGTTCC
CTCCCTCTGTTCTCTGTCTGTCTGCCTGTCTACATGTCCTCTTGTCTGTC
TCTATCCTTTCCCCAGGTCCTTATTCCCCTCCCCTCCCAATAAACACCTT
TTACACCAGATCTGTTGTAGGGCATAATTTCTCAGGGGTACACCTTTGCA
TGGGCCTGTCAAAGGTACCCCCAACCCCAGCACATTATATTTCACAATAG
CCTGGTCCAGTGATGCCTTTAAACTCCTCTGGTCTAGTTTCCTACCTAGC
AAGGCCCATGGATACCCTCCTTCTACAGCTTCCCAAGGGCTAGGTGATCT
CAGGGCAGCTCCATTCT

ACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTTTGAGGACGGTGATGTTCTAGCT
CCCCCGCAGCAATGCATTCTGGATCAAAGCTTTTCCTTCACTAAGTTAAG
GACCAACAGAGGGCACGAGGCGAAAAGCTGGCCGTTCCAAAGAGTAGTCA
TGGAAATTGCATCTGACAGAGTGATTTCTTAATGTTAAAATGACTCACGT
ATAATTAGACTGAAGGACAGAGAAAGGAAACCACCAAAACAAAAATTTCC
TACTGAGTGACTGAGTGACTGCAGGTCTTATAAAGATAGAGACTGCTTAG
AGAAACAGCTTGCCTCTTCTCTAGAGCCTTTACGTTTCTTTCCCTTGTCT
TCTTTGAGACAAACCTTCAGCGGCCTCCCATGGAGCGATACCTAGCATGT
TCTCATGTGGCATGTGTCTCCCAGTGCTGTCTGTGTCCTGCAGCAGTGAA
AGGAGGCCATAGTTCTGAACTAACCTGAAATAACCTCATTATTTTAGTGA
AGAGCCCCTGTCCCACTACTACAGGACACAGCCACTGCAGGGACTTGATG
GAAACTGTTGAGGATTCTCTTGAGTTGTCTTCACTGTGTTTCTGGTCCAG
GTAAAATTTACAGTTGTTCTCTACCTTAGATCTAGTGTAGGGGAGGCCAT
TGTGCACAGTCTGGTN

Query= MSMg01no232_n24.g1 MSMg01no232_n24.g1 CHROMAT_FILE:
MSMg01no232_n24.g1 PHD_FILE: MSMg01no232_n24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:28 2005
         (589 letters)



>mm_chr9_103652315_103653303
          Length = 989

 Score = 1106 bits (572), Expect = 0.0
 Identities = 584/588 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agcttttccttcactaagttaaggaccaacagagggcacgaggcgaaaagctggccgttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 agcttttccttcactaagttaaggaccaacagagggcacgaggcgaaaagctggccgttc 729

                                                                       
Query: 61  caaagagtagtcatggaaattgcatctgacagagtgatttcttaatgttaaaatgactca 120
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 728 caaagagtagtcatggaaattgcaactgacagagtgatttcttaatgttaaaatgactca 669

                                                                       
Query: 121 cgtataattagactgaaggacagagaaaggaaaccaccaaaacaaaaatttcctactgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cgtataattagactgaaggacagagaaaggaaaccaccaaaacaaaaatttcctactgag 609

                                                                       
Query: 181 tgactgagtgactgcaggtcttataaagatagagactgcttagagaaacagcttgcctct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 608 tgactgagtgactgcaggtcttataaagatagagactgcttagagaaacagcttgccact 549

                                                                       
Query: 241 tctctagagcctttacgtttctttcccttgtcttctttgagacaaaccttcagcggcctc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 548 tctctagagcctttacgtttctttcccttgtcttctttgagacaaaccttcagtgggctc 489

                                                                       
Query: 301 ccatggagcgatacctagcatgttctcatgtggcatgtgtctcccagtgctgtctgtgtc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ccatggagcgatacctagcatgttctcatgtggcatgtgtctcccagtgctgtctgtgtc 429

                                                                       
Query: 361 ctgcagcagtgaaaggaggccatagttctgaactaacctgaaataacctcattattttag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ctgcagcagtgaaaggaggccatagttctgaactaacctgaaataacctcattattttag 369

                                                                       
Query: 421 tgaagagcccctgtcccactactacaggacacagccactgcagggacttgatggaaactg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tgaagagcccctgtcccactactacaggacacagccactgcagggacttgatggaaactg 309

                                                                       
Query: 481 ttgaggattctcttgagttgtcttcactgtgtttctggtccaggtaaaatttacagttgt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ttgaggattctcttgagttgtcttcactgtgtttctggtccaggtaaaatttacagttgt 249

                                                           
Query: 541 tctctaccttagatctagtgtaggggaggccattgtgcacagtctggt 588
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tctctaccttagatctagtgtaggggaggccattgtgcacagtctggt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space:   566841
Effective search space used:   566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)