Query= MSMg01no237_e22.b1 MSMg01no237_e22.b1 CHROMAT_FILE:
MSMg01no237_e22.b1 PHD_FILE: MSMg01no237_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:06 2005
(239 letters)
>mm_chr9_49055828_49056466
Length = 639
Score = 408 bits (211), Expect = e-118
Identities = 217/219 (99%)
Strand = Plus / Plus
Query: 4 ggaattctttgcagtttttcttcctgacttctgggagggcccctagagttcctcacgcca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctttgcagtttttcttcctgacttctgggagggcccctagagttcctcacgcca 263
Query: 64 ggtcctgcagcctactccacagttctttgggtgttccctgggtttctgagatagatctgg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggtcctgcagcctactccacagttctttgggtgttccctgggtttctgagatagatctgg 323
Query: 124 aacaagcggatcaccttagagttcatctctgtgaaccctgaaatgaggtgctttacaggt 183
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aacaagtggatcaccttagagttcatctctgtgaaccctgaaatgaggtgctttacaggt 383
Query: 184 agggtccaggattagagaagtatgtgtgtgtgtgtgtgt 222
||||||||||||||||||||| |||||||||||||||||
Sbjct: 384 agggtccaggattagagaagtgtgtgtgtgtgtgtgtgt 422
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no237_e22.g1 MSMg01no237_e22.g1 CHROMAT_FILE:
MSMg01no237_e22.g1 PHD_FILE: MSMg01no237_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:06 2005
(281 letters)
>mm_chr9_49146128_49146810
Length = 683
Score = 505 bits (261), Expect = e-147
Identities = 277/283 (97%), Gaps = 2/283 (0%)
Strand = Plus / Minus
Query: 1 tcccagattcctggctgccagggccctctggaggtcactcagtgcctcccctaccaccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 483 tcccagattcctggctgccagggccctctggaggtcactcagtgcctccccaaccaccag 424
Query: 61 acagaactggactcaacccaagtacatcaggtgggagtgggacaccctttaccctcatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 acagaactggactcaacccaagtacatcaggtgggagtgggacaccctttaccctcatat 364
Query: 121 gcttcttggaaaaagagatacaaacgtttggtttt--ttttttaactccttaattgtatg 178
||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 363 gcttcttggaaaaagagatacaatcgttttgttttgtttttttaactccttaattgtatg 304
Query: 179 ttacagagcttgggagttgagatattctaccctatatgtctcttaaatctttaatttacc 238
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 303 ttacagagcttgggagttgagatattctaccatatatgtctcttaaatctttaatttacc 244
Query: 239 tctatctttgatgtgtgggttaagtataacgtacatatttgtg 281
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tctatctttgatgtgtgggttaagtataacgtacatatttgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 683
Length adjustment: 9
Effective length of query: 272
Effective length of database: 674
Effective search space: 183328
Effective search space used: 183328
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
