Query= MSMg01no260_g09.b1 MSMg01no260_g09.b1 CHROMAT_FILE:
MSMg01no260_g09.b1 PHD_FILE: MSMg01no260_g09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:29 2005
(117 letters)
>mm_chr9_95006051_95006566
Length = 516
Score = 188 bits (97), Expect = 1e-52
Identities = 112/119 (94%), Gaps = 5/119 (4%)
Strand = Plus / Minus
Query: 1 gagtaattctgtagctcttcccccagtcttcgtctcaattctgtataataaaaaaa--at 58
||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 316 gagtaattctgtagctcttcccccagtcttcgtctcaattctgtataat---aaaaggat 260
Query: 59 cctatttttattatactgaattgaggatgaaataatatactaatatctcctagaaagtt 117
|||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 259 cctatttttattatacagaattgaggatgaaataatatacaaatatctcctagaaagtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 117
Length of database: 516
Length adjustment: 8
Effective length of query: 109
Effective length of database: 508
Effective search space: 55372
Effective search space used: 55372
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no260_g09.g1 MSMg01no260_g09.g1 CHROMAT_FILE:
MSMg01no260_g09.g1 PHD_FILE: MSMg01no260_g09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:29 2005
(478 letters)
>mm_chr9_94851322_94852199
Length = 878
Score = 826 bits (427), Expect = 0.0
Identities = 474/511 (92%), Gaps = 33/511 (6%)
Strand = Plus / Plus
Query: 1 cattcaatgtattttaatcacattccccaccccccaacttttctcagatcctccatcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattcaatgtattttaatcacattccccaccccccaacttttctcagatcctccatcaaa 260
Query: 61 cccttacctgcccaacattgtgtcttcttctttttttaaaaccttggattccaatttgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccttacctgcccaacattgtgtcttcttctttttttaaaaccttggattccaatttgtg 320
Query: 121 ctgttcttatattcttgaatgtgtagccttctaccagagcattcttaaagaaaatccacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgttcttatattcttgaatgtgtagccttctaccagagcattcttaaagaaaatccacc 380
Query: 181 accaccacc---------------------------------cccactcctggcagcatt 207
||||||||| ||||||||||||||||||
Sbjct: 381 accaccaccaccaccaccaccaccaccaccaccaccaccacccccactcctggcagcatt 440
Query: 208 caattgccaatagctcctcatgcagttgtgggacttgttgcccatctctcctttccatgc 267
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 441 caattgccaatagctcctcatgcagttgtgggacttggtgcccatctctcctttccatgc 500
Query: 268 tagactttcgtatggctttagctggcatatgtctcttgcatcccatcagccactgtaagt 327
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 501 tagactttcgtatggctttagctggcataggtctcttgcatcccatcagccactgtaagt 560
Query: 328 tcatacatgcacccgccctgctgtgttcaggaaaggattgaaccttgtagttatctctgc 387
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcatacatgcagctgccctgctgtgttcaggaaaggattgaaccttgtagttatctctgc 620
Query: 388 ctctttcagcccttgagctttgagagaaggggttggcatatgcacatcccatttaggggt 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctctttcagcccttgagctttgagagaaggggttggcatatgcacatcccatttaggggt 680
Query: 448 gagaaatatgcagtttcttattctctgcacc 478
|||||||||||||||||||||||||||||||
Sbjct: 681 gagaaatatgcagtttcttattctctgcacc 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 878
Length adjustment: 10
Effective length of query: 468
Effective length of database: 868
Effective search space: 406224
Effective search space used: 406224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
