Query= MSMg01no261_b10.b1 MSMg01no261_b10.b1 CHROMAT_FILE:
MSMg01no261_b10.b1 PHD_FILE: MSMg01no261_b10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:23 2005
(413 letters)
>mm_chr9_60819117_60819926
Length = 810
Score = 737 bits (381), Expect = 0.0
Identities = 404/413 (97%), Gaps = 3/413 (0%)
Strand = Plus / Minus
Query: 1 aagttgaaagtcgagtttgaaagtcaagtttaagccagcctagcccagaccgactgtaca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 610 aagttgaaagtcgagtttgaaagtcaagtttaagccagcctagcccagaccgacagtaca 551
Query: 61 tcttttgatagtacttctttttcatccagctttcgagcaagggacctcgtagctcagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tcttttgatagtacttctttttcatccagctttcgagcaagggacctcgtagctcagcag 491
Query: 121 atcaagtaccttcttcaaggttccgcaggagatcagtagatgagacagcatttgccttca 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 490 atcaagtaccttcttcaaggttccgc---agatcagtagatgagacagcatttgccttca 434
Query: 181 agtgctgctgtctttggaaccctagacaatgcaaaggagcctctgcctctccctccctcc 240
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 433 agtgctgctgtcattggaaccctagacaatgcaaaggagcctctgcctctccctcccttc 374
Query: 241 cttgacagagtccttcacactccccaccccagcgtctgttctctcaagcatagatgtttc 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 373 cttgacagagtccttcacactccccaccccagcgtctgttctctcaaacatagatgtttc 314
Query: 301 cattggcatggtttttgttaccctctaccactacaacagatgagcagaaatgccttctcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cattggcatggtttttgttaccctctaccactacaacagatgagcagaaatgccttctcc 254
Query: 361 actcagggacattcttgctggcctctagggtttcctgtgactcaactgaatgg 413
|||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 253 actcagggacattcttgctggcttctagggtttcctgggactcaactgaatgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 810
Length adjustment: 9
Effective length of query: 404
Effective length of database: 801
Effective search space: 323604
Effective search space used: 323604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no261_b10.g1 MSMg01no261_b10.g1 CHROMAT_FILE:
MSMg01no261_b10.g1 PHD_FILE: MSMg01no261_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:23 2005
(412 letters)
>mm_chr9_60656597_60657408
Length = 812
Score = 774 bits (400), Expect = 0.0
Identities = 409/412 (99%)
Strand = Plus / Plus
Query: 1 tccatgttcagcacagttttcataggtttctgggagctccagtgagagcagatttgagag 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 tccatgttcagcacagttttcataggtttctgggatctccagtgagagcagatttgagag 260
Query: 61 ggtcaagcttggagcagttctgagcatttgaaatggtgcagcctggagccgatgagggcc 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtcaagcttggagcagttccgagcatttgaaatggtgcagcctggagccgatgagggcc 320
Query: 121 cagagcatgcaatgctggagagactggagagttaggcgcctaagacctatacaagtgacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagagcatgcaatgctggagagactggagagttaggcgcctaagacctatacaagtgacc 380
Query: 181 atcaaagccatccagtcaacagacagattgtcagaatcctacccacccctagcccgagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcaaagccatccagtcaacagacagattgtcagaatcctacccacccctagcccgagag 440
Query: 241 agtcccacaagccctgtgtttgaagccagtctgtgagtacctggtaattatgctcttagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtcccacaagccctgtgtttgaagccagtctgtgagtacctggtaattatgctcttagt 500
Query: 301 aggtaaccacacatcagcagcccaggtgggtgtttaaatatccttatctgtagtcagatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggtaaccacacatcagcagcccaggtgggtgtttaaatatccttatctgtagtcagatg 560
Query: 361 aatggctcagggtgctgttggagtttggaaaaatacctcggacagctaaact 412
|||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 561 aatggctcagggtgctgttggactttggaaaaatacctcggacagctaaact 612
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 812
Length adjustment: 9
Effective length of query: 403
Effective length of database: 803
Effective search space: 323609
Effective search space used: 323609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|