ATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAAATCCGCGG
AATTCTTTGTTTATCTCCGAACACCAATTTTTAATGGGGTTATTGGGTTT
TCTGGAGTCCACCTTCTTAATTTCTTTATATATATTGGATATTAGTCCGC
TATCTGATTTAGGATAGGTAAAGATCCTTTCTCAATCTGTTGGTGGCCTT
TTTGTTTTATTGACAGTGTCTTTTGCCTTACAGAAGCTTTGCAATTTTAT
GAGATCCCATTTGTCGATTCTCGATCTTACAGCACAAGCCATTGCTGTTC
TATTCAGGAATTTTTCCCCTGTGCCCATATCTTCGAGGATTTTCCCCACT
TTCTCCTCTATAAGTTTCACTGTCTCTGCTTCTATGTGGAGTTCCTTGAT
ACACTTAAATTTGACATTAGTACAAGGAGATAGGAATGGATCAATTCCCA
TTCTTCTTCATGATAACCGGCAGTTGTGTCAGCACCATTTGTTGGATGCT
GTCTTTTTTCCACTGGATGGTTTTAGCTCCTTTGTCAAAGATCAAGTAAC
CATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTTCATTGGTCT
ACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAATTGCTCT
GTAGTACAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGTTCTTTTAT
CCTTGAGAAAAGTTTTTGCTACTCTAGGTTCTTTTGTTATTCC

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTGTTTACAAGAGAGAGAAGGAAGGAAC
AAGTAGGAAGATTAGAGGCATGAAAAGACAGGAGGGAGAAAGGGGAGCTA
GAAGGAAGTCGGGAAGAGTTTTGTTTTGTTCATATAGTTACTTATCAGAA
AAAAGAAATAGCCTGTGAATTGAAAGCCAAAGTAAGTCAGGTATTTCCAG
AGGCTAGACCTGCTGCTTATTTTTCATCCTTCAATCAATCTCGCTTTCCA
CGAGAAAACTTATTATATTTGATTGTAAATATACTTTCATTTTAAAAATT
ATCTACACTTTTAGCACTTTTAAAATTCACCTTCTGAGACTAACACGATG
GAATTCCTTACTTACATTACCTGTAATTTCATAAGTTATTACATGAGAAA
TCATAACTGTATGTTTGGCACAAAGATCTATTTATTGGTTGCCAGGATGA
AAAATGTTTCAGAAGAAGTCATTATTGTGTGTCATTACATGACTGGATAT
TAGGTGGGTTTCTTCCATAATCTCTTTTAATCAAGAAAATATAAAAAAAA
TAATAATTACTGCCAGGCAGCTCTATGTTTGATTTAGAGCGCATGTTTGA
TAGTATTCAATTGTGCTGTTTCTGACTGGAAATCTTCAGGGAATTACATT
CATTGCTACTGGGAAATGCATATTGCGAGTTCCGGGN

Query= MSMg01no261_k19.g1 MSMg01no261_k19.g1 CHROMAT_FILE:
MSMg01no261_k19.g1 PHD_FILE: MSMg01no261_k19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:07 2005
         (664 letters)



>mm_chr9_92737764_92738827
          Length = 1064

 Score = 1228 bits (635), Expect = 0.0
 Identities = 656/663 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtttacaagagagagaaggaaggaacaagtaggaagattagaggcatgaaaagacagga 60
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgttttcaagagagagaaggaaggaacaagtaggaagattagaggcatgaaaagacagga 260

                                                                       
Query: 61  gggagaaaggggagctagaaggaagtcgggaagagttttgttttgttcatatagttactt 120
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggagaaaggggaactagaaggaagtcgggaagagttttgttttgttcatatagttactt 320

                                                                       
Query: 121 atcagaaaaaagaaatagcctgtgaattgaaagccaaagtaagtcaggtatttccagagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcagaaaaaagaaatagcctgtgaattgaaagccaaagtaagtcaggtatttccagagg 380

                                                                       
Query: 181 ctagacctgctgcttatttttcatccttcaatcaatctcgctttccacgagaaaacttat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctagacctgctgcttatttttcatccttcaatcaatctcgctttccacgagaaaacttat 440

                                                                       
Query: 241 tatatttgattgtaaatatactttcattttaaaaattatctacacttttagcacttttaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatatttgattgtaaatatactttcattttaaaaattatctacacttttagcacttttaa 500

                                                                       
Query: 301 aattcaccttctgagactaacacgatggaattccttacttacattacctgtaatttcata 360
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 501 aattcaccttctgagactaacacgatggatttccttacttacattacctgtaatttcata 560

                                                                       
Query: 361 agttattacatgagaaatcataactgtatgtttggcacaaagatctatttattggttgcc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agttattacatgagaaatcataactgtatgtttggcacaaagatctatttattggttgcc 620

                                                                       
Query: 421 aggatgaaaaatgtttcagaagaagtcattattgtgtgtcattacatgactggatattag 480
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggatgaaaaatgtttcagaggaagtcattattgtgtgtcattacatgactggatattag 680

                                                                       
Query: 481 gtgggtttcttccataatctcttttaatcaagaaaatataaaaaaaataataattactgc 540
           |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtgggttttttccatagtctcttttaatcaagaaaatataaaaaaaataataattactgc 740

                                                                       
Query: 541 caggcagctctatgtttgatttagagcgcatgtttgatagtattcaattgtgctgtttct 600
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 741 caggcagctctatgtttgatttagagagcatgtttgatagtattcaattgtgctgtttct 800

                                                                       
Query: 601 gactggaaatcttcagggaattacattcattgctactgggaaatgcatattgcgagttcc 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gactggaaatcttcagggaattacattcattgctactgggaaatgcatattgcgagttcc 860

              
Query: 661 ggg 663
           |||
Sbjct: 861 ggg 863


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space:   689316
Effective search space used:   689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)