Query= MSMg01no262_e12.b1 MSMg01no262_e12.b1 CHROMAT_FILE:
MSMg01no262_e12.b1 PHD_FILE: MSMg01no262_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:53 2005
(570 letters)
>mm_chr9_75784099_75785069
Length = 971
Score = 1067 bits (552), Expect = 0.0
Identities = 565/570 (99%), Gaps = 3/570 (0%)
Strand = Plus / Plus
Query: 3 cggaattccctga--ttcatcaaccatttgatctttattttcatcataggagatttatag 60
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cggaattccctgaaatt-atcaaccatttgatctttattttcatcataggagatttatag 261
Query: 61 acagcaggtgtaattctgctatgttttctggcagttttatacctagaactttaagcataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 acagcaggtgtaattctgctatgttttctggcagttttatacctagaactttaagcataa 321
Query: 121 taatagctcctgttttttccttttaaatacaaaaggttttctctattgtgtattacaaga 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tgatagctcctgttttttccttttaaatacaaaaggttttctctattgtgtattacaaga 381
Query: 181 aaaaagagagggctcacagtgacttaatttcccataatcccccactttgctgtaaagtga 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 382 aaaaagagagggctcacagtgacttaatttcccataatccctcactttgctgtaaagtga 441
Query: 241 acttcaaaccgttaagtgatgttttatgtaggtgtgacttaagagctaaaggatacaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 acttcaaaccgttaagtgatgttttatgtaggtgtgacttaagagctaaaggatacaatc 501
Query: 301 atatgcttgagttttatgtgaatgttttgctggtcttggcgctttttacttttatttgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 atatgcttgagttttatgtgaatgttttgctggtcttggcgctttttacttttatttgtt 561
Query: 361 ttgttggcttttacacatccatatgctaaggtttgggcctagtgaggccatcattattgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ttgttggcttttacacatccatatgctaaggtttgggcctagtgaggccatcattattgt 621
Query: 421 aaacaaccccctagcttctgaaacccagaagcattatcttctgattgcaagaatacctag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 aaacaaccccctagcttctgaaacccagaagcattatcttctgattgcaagaatacctag 681
Query: 481 caacattgcttatgttttaatttgagctatgtaacaatctgtggatgtattgtttacata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 caacattgcttatgttttaatttgagctatgtaacaatctgtggatgtattgtttacata 741
Query: 541 tgaatttatcttcccaatatttctttctaa 570
||||||||||||||||||||||||||||||
Sbjct: 742 tgaatttatcttcccaatatttctttctaa 771
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 971
Length adjustment: 10
Effective length of query: 560
Effective length of database: 961
Effective search space: 538160
Effective search space used: 538160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no262_e12.g1 MSMg01no262_e12.g1 CHROMAT_FILE:
MSMg01no262_e12.g1 PHD_FILE: MSMg01no262_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:53 2005
(502 letters)
>mm_chr9_75937723_75938624
Length = 902
Score = 652 bits (337), Expect = 0.0
Identities = 343/345 (99%), Gaps = 1/345 (0%)
Strand = Plus / Minus
Query: 156 ccccccactccaagaaaagaagtttgagtctagcccctagtacccaggtaaaacgccctg 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 ccccccactccaagaaaagaagtttgagtctagcccctagtacccaggtaaaacgccctg 830
Query: 216 cctggtagcagattcctcgaatttcagcactggggaagaggagatgggtgaatccttggg 275
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 829 cctggtagcagattcctcgaatttcagcactggggaagaggagat-ggtgaatccttggg 771
Query: 276 attcaataggcaatcagtcccatggtgagctgcagttccttgtgaaagatcctgtctcaa 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 attcaataggcaatcagtcccatggtgagctgcagttccttgtgaaagatcctgtctcaa 711
Query: 336 aaaccaaggtataaattaaaaacagaaagtagtgtgttactgccctgtttaggggaataa 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 aaaccaaggtataaattaaaaacagaaagtagtgtgttactgccctgtttaggggaataa 651
Query: 396 taatgccacatagaaatttaatcctctcatacttcatttcttcacaacttttactaacaa 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 650 taatgccacatagaaatttaatcctctcatacttcatttcttcacaacttttactaaaaa 591
Query: 456 tgataaattttgtatctgctgaatcatcattgaatctttggatta 500
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tgataaattttgtatctgctgaatcatcattgaatctttggatta 546
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
