Query= MSMg01no262_g23.b1 MSMg01no262_g23.b1 CHROMAT_FILE:
MSMg01no262_g23.b1 PHD_FILE: MSMg01no262_g23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:05 2005
(660 letters)
>mm_chr9_112127541_112128599
Length = 1059
Score = 1151 bits (595), Expect = 0.0
Identities = 640/655 (97%), Gaps = 1/655 (0%)
Strand = Plus / Minus
Query: 6 gaattcatgattctcatgacttccagatgctgagattgtaaacatgccactatgaccaac 65
||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||
Sbjct: 859 gaattcatgattctcatgacttccagatgctgaaatcgtagacatgccactatgaccaac 800
Query: 66 tgccaaatataaatggcagcttttgtatttaaaatcaatgagcagcttaattctttatgt 125
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 799 tgccaaatataaatggcagctttggtatttaaaatcaatgagcagcttaattctttatgt 740
Query: 126 ctgggacttatcaaagatcaaggtagtgactaaatctcaagagtgctggttggaaaaaga 185
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ctgggacttatcaaagaccaaggtagtgactaaatctcaagagtgctggttggaaaaaga 680
Query: 186 gcacagtgcttcctaaggccctttcttccatcagtacctaagggaagggatgtctgcctg 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gcacagtgcttcctaaggccctttcttccatcagtacctaagggaagggatgtctgcctg 620
Query: 246 cctaagagttctccaaacctattattggttcagaccactgcatttgtctcatttctacca 305
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 cctaagagttctccaaacttattattggttcagaccactgcatttgtctcatttctacca 560
Query: 306 tctaaaacagacagcccagttttcaaatctttgaacgggtgatggtcagaatagctccat 365
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 559 tctaaaacagacagcccagttttcaaatctttgaacaggtgatggtcagaatagctccat 500
Query: 366 gaaggaataacttttcaggagccaggtagggggagccactcaacaagacttcagacagca 425
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 499 gaaggaataacttttcaggagccaggtagggggagccactcaacaagagttcagacagta 440
Query: 426 tgggagatttaaaaaaaaatttcttttctaacctaggacaaagagcaagcgtagagtttg 485
||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 439 tgggagatt-aaaaaaaatttttttttctaacctaggacaaagagcaagcgtagagtttg 381
Query: 486 ggggtttccaagaagctcctgttattctaccagaccccagcttcctgtctctcagagttc 545
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 380 ggggtttccaagaagctcctgttattctaccagactccagcttcctgtctctcagagttc 321
Query: 546 tttggacagagcagtggagctggcctctgatcctgaagtgtctgcggataattttgttca 605
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 320 tttggacagagcagtggagctggcctctgatcctgaagtttctgaggataattttgttca 261
Query: 606 gtgagtcagcaccctggcttctgaggagtacaggctgaggaggactggatctgct 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gtgagtcagcaccctggcttctgaggagtacaggctgaggaggactggatctgct 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1059
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1049
Effective search space: 681850
Effective search space used: 681850
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no262_g23.g1 MSMg01no262_g23.g1 CHROMAT_FILE:
MSMg01no262_g23.g1 PHD_FILE: MSMg01no262_g23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:05 2005
(587 letters)
>mm_chr9_112013872_112014858
Length = 987
Score = 1079 bits (558), Expect = 0.0
Identities = 582/594 (97%), Gaps = 7/594 (1%)
Strand = Plus / Plus
Query: 1 tcacgagtcggctcggcttttgcagtacaatacagtttccaccctctctttaaattcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 tcacgagtcggctcggcttttgcagtacaatacagtttccaccctctctttaaattcttt 253
Query: 61 gacaatttcatatattttccgagtttttaatcttctatcccccgcacccatccaacctaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gacaatttcatatattttccgagtttttaatcttctatcccccgcacccatccaacctaa 313
Query: 121 tttttttctttccaacaaggatccccctatgttgatgtccttacaaaaatatttatattt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 314 tttttttctttccaacaaggatccccctatgttgatgtccttacaaaaatatttattttt 373
Query: 181 gttttatgtatatgaatggttgcctgtatgtctatatgtgtaccacgtgcatgaagttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gttttatgtatatgaatggttgcctgtatgtctatatgtgtaccacgtgcatgaagttcc 433
Query: 241 cagaaaggtcagcagagggcagcagatctcctggcactagagttgccattggttatattg 300
||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||
Sbjct: 434 cagaaaggtcagcagagggcagcagatatcccggcaccagagttgccattggttatattg 493
Query: 301 ccccatatgggtactgataatggaacccgtttcctctccaagagcactaactgttcttaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ccccatatgggtactgataatggaacccgtttcctctccaagagcactaactgttcttaa 553
Query: 361 cctccgagccattttcctttctccagtcaatcttt-------tttttttcttacagatac 413
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 554 cctccaagccattttcctttctccagtcaatctttgtttttctttttttcttacagatac 613
Query: 414 tagttatggttgtttatctgaacatgagcctgagtggggagattccatctgaactataat 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 tagttatggttgtttatctgaacatgagcctgagtggggagattccatctgaactataat 673
Query: 474 ttgaaatgtgaaacatttttttcatagacaaatctctctctctacagtacagtttttgcc 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ttgaaatgtgaaacatttttttcatagacaaatctctctctctacagtacagtttttgcc 733
Query: 534 ccaaaagaagtcagtcagcaggtgtttggctctgaggaggatgcacagggcaaa 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 ccaaaagaagtcagtcagcaggtgtttggctctgaggaggatgcacagggcaaa 787
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space: 563729
Effective search space used: 563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
