Query= MSMg01no264_a17.b1 MSMg01no264_a17.b1 CHROMAT_FILE:
MSMg01no264_a17.b1 PHD_FILE: MSMg01no264_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:08 2005
(247 letters)
>mm_chr9_50192119_50192765
Length = 647
Score = 445 bits (230), Expect = e-129
Identities = 232/233 (99%)
Strand = Plus / Plus
Query: 15 aattcatgtgagaataaatctgagttgtaaaacttttagggacctttgaaaattactcca 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 aattcatgtgagaataaatctgagttgtaaaacttttagggacctttgaaaattactcca 274
Query: 75 cccatcccacatgttgaactacaaacaacttcagagaagaaatgttggaagatcctgctc 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 cccatcccacatgttgaactacaaacaacttcagagaagaaatgttggaagatcctgctc 334
Query: 135 tcaggctgccccactgatgcacatggctgccaggtaagggccaggcagccacaatgcagg 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tcaggctgccccactgatgcacatggctgccaggtaagggccaggcagccacaatgcagg 394
Query: 195 agggtctgagctggagtgatctccagctgcgncccagacagtcttttagctgc 247
||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 395 agggtctgagctggagtgatctccagctgcgtcccagacagtcttttagctgc 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no264_a17.g1 MSMg01no264_a17.g1 CHROMAT_FILE:
MSMg01no264_a17.g1 PHD_FILE: MSMg01no264_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:08 2005
(289 letters)
>mm_chr9_50343296_50343984
Length = 689
Score = 543 bits (281), Expect = e-159
Identities = 288/291 (98%), Gaps = 2/291 (0%)
Strand = Plus / Minus
Query: 1 cctcagatcaactatggccgattcaatggcaaaaagtatagtttcttctatggctgcggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 cctcagatcaactatggccgattcaatggcaaaaagtatagtttcttctatggctgcggt 348
Query: 61 tttcgacatttggtgggggattctctgattaaggttgacgtgacgaacaagacactaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tttcgacatttggtgggggattctctgattaaggttgacgtgacgaacaagacactaagg 288
Query: 121 gtaaaaaagtctcttctttcattttttttcctaagtattgttttgccctttgaattaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gtaaaaaagtctcttctttcattttttttcctaagtattgttttgccctttgaattaagt 228
Query: 181 tctgctttgtttaaagtccttcagacgtattatttttttcaaaaaatttaatatctattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 tctgctttgtttaaagtccttcagacgtattatttttttcaaaaaatttaatatctattt 168
Query: 241 gtttatttta--tgtgtgtgtgcctgagggtattatggtcaccacacatgt 289
|||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 167 gtttattttatgtgtgtgtgtgcctgagggtattatgggcaccacacatgt 117
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
