Query= MSMg01no264_f15.b1 MSMg01no264_f15.b1 CHROMAT_FILE:
MSMg01no264_f15.b1 PHD_FILE: MSMg01no264_f15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:30 2005
(316 letters)
>mm_chr9_107679621_107680336
Length = 716
Score = 572 bits (296), Expect = e-168
Identities = 308/312 (98%)
Strand = Plus / Plus
Query: 4 ggaattctggggttatgattgggaactgtttgactggaaacaagaagaggaagttgagag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctggggttatgattgggaactgtttgactggaaacaagaagaggaagttgagag 263
Query: 64 gtcatattatatccagcaacagttagcatgcaattggagaatggagattccacagagaaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtcatattatatccagcaacagttagcatgcaattggagaatggagattccacagagaaa 323
Query: 124 tagtccaagaatatgacattatcaggcttataagaagatatagtgttattggtaagagtt 183
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 324 tagtccaagaatatgacattatcaggcttataagaagatatagtgctattggtaagagtt 383
Query: 184 ttgaggatagccactttagccctggctttcagtagcagaagcattgcagccagccaacct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttgaggatagccactttagccctggctttcagtagcagaagcattgcagccagccaacct 443
Query: 244 tccatgaaaacatgcatatattcagtgtattataaaaaaaagtggtcaaatggccatggt 303
||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 444 tccatgaaaacatgcatatattcagtgtaaaaaaaaaaaaagtggtcaaatggccatggt 503
Query: 304 ggtcttactgga 315
||||||||||||
Sbjct: 504 ggtcttactgga 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no264_f15.g1 MSMg01no264_f15.g1 CHROMAT_FILE:
MSMg01no264_f15.g1 PHD_FILE: MSMg01no264_f15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:30 2005
(194 letters)
>mm_chr9_107879762_107880355
Length = 594
Score = 335 bits (173), Expect = 1e-96
Identities = 192/205 (93%), Gaps = 11/205 (5%)
Strand = Plus / Minus
Query: 1 agcagattcctaagtgggaaagcctgacattgctgctagactgggaagtgctactgaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 agcagattcctaagtgggaaagcctgacattgctgctagactgggaagtgctactgaagg 253
Query: 61 atgtccaacaccagccagagacactgaaggcatcctcacatgagcacagctt-------- 112
|||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 252 atgtccaacaccagccagagacactgaaggcatcctcaaatgagcacagcttccgacctg 193
Query: 113 ---gtgatggcttaagggtggagcaagcaggcatctccaggcggtaggcctagtacatct 169
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 192 cttgtgatggcttaagggtggagcaagcaggcatctccaggcggtaggcctggtacatct 133
Query: 170 atgggcacagcctccaatggagtga 194
|||||||||||||||||||||||||
Sbjct: 132 atgggcacagcctccaatggagtga 108
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
