Query= MSMg01no265_i02.b1 MSMg01no265_i02.b1 CHROMAT_FILE:
MSMg01no265_i02.b1 PHD_FILE: MSMg01no265_i02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:00 2005
(159 letters)
>mm_chr9_60711393_60711950
Length = 558
Score = 292 bits (151), Expect = 7e-84
Identities = 154/155 (99%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 5 gaattcactctttatttaatgtgcctaaatgtgttccctaactgcatgcccctcgtaggc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactctttatttaatgtgcctaaatgtgttccctaactgcatgcccctcgtaggc 264
Query: 65 taggtgagaacatctcagccggtggtggcgtgtaggtgacatttagttcctttccagact 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taggtgagaacatctcagccggtggtggcgtgtaggtgacatttagttcctttccagact 324
Query: 125 ctcttcctgaagctgctcccttgtncttgtacttt 159
|||||||||||||||||||||||| ||||||||||
Sbjct: 325 ctcttcctgaagctgctcccttgt-cttgtacttt 358
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 159
Length of database: 558
Length adjustment: 8
Effective length of query: 151
Effective length of database: 550
Effective search space: 83050
Effective search space used: 83050
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no265_i02.g1 MSMg01no265_i02.g1 CHROMAT_FILE:
MSMg01no265_i02.g1 PHD_FILE: MSMg01no265_i02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:00 2005
(290 letters)
>mm_chr9_60832356_60833045
Length = 690
Score = 530 bits (274), Expect = e-155
Identities = 286/290 (98%)
Strand = Plus / Minus
Query: 1 catggaggagagagtcattgaactctcgcctgagatctcagccatttgtatgtaattatg 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 catggtggagagagtcattgaactctcgcctgagatctcagccatttgtatgtaattatg 431
Query: 61 tcttcacctcacatgcccccctggtctctgtgggggttagaatatatatttggggggtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tcttcacctcacatgcccccctggtctctgtgggggttagaatatatatttggggggtta 371
Query: 121 tctgaaagagggggactccatctatgcaacttggagaagtcatccatactgggtgagaat 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 370 tctgaaagagggggactccatctatgcaacttggggaagtcatccatactgggtgagaat 311
Query: 181 tttccaatgtggctgcttttggaggggtcacttacactcctataagtaaatcttcacctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 310 tttccaatgtggctgcttttggaggggtcacttacactcctataagtaaatctgcacctc 251
Query: 241 cgctctgtatgtaaagccagtgagcactttggttctccatggtagactag 290
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tgctctgtatgtaaagccagtgagcactttggttctccatggtagactag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
