Query= MSMg01no265_l02.b1 MSMg01no265_l02.b1 CHROMAT_FILE:
MSMg01no265_l02.b1 PHD_FILE: MSMg01no265_l02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:16 2005
(320 letters)
>mm_chr9_54400922_54401641
Length = 720
Score = 574 bits (297), Expect = e-168
Identities = 314/325 (96%), Gaps = 9/325 (2%)
Strand = Plus / Plus
Query: 5 gaattcttccccagatgggagctggttactgagt---------gtatggatctacagagc 55
|||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 196 gaattcttccccagatgggagctggttactgagtatggttactgtatggatctacagagc 255
Query: 56 tttgactggctttaagagcgttatacctgctggggtggtaaggaactggatcagaataga 115
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 256 tttgactggctttaagagcgttataagtgctggggtggtaaggaactggatcagaataga 315
Query: 116 aacaccgtgagcctcagagcacacgcagcccagaatcagcatgtacaaagctagggctaa 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aacaccgtgagcctcagagcacacgcagcccagaatcagcatgtacaaagctagggctaa 375
Query: 176 gagggttgaaagcacacctcaatgaaggattcctatggaattcctactgatagagggctt 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gagggttgaaagcacacctcaatgaaggattcctatggaattcctactgatagagggctt 435
Query: 236 gtcccaagaactctggaaggttagagtcagcactgaaaaatcctcactgaggacacattc 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gtcccaagaactctggaaggttagagtcagcactgaaaaatcctcactgaggacacattc 495
Query: 296 aggatagttccagtggtcaggaact 320
|||||||||||||||||||||||||
Sbjct: 496 aggatagttccagtggtcaggaact 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no265_l02.g1 MSMg01no265_l02.g1 CHROMAT_FILE:
MSMg01no265_l02.g1 PHD_FILE: MSMg01no265_l02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:16 2005
(292 letters)
>mm_chr9_54540704_54541395
Length = 692
Score = 549 bits (284), Expect = e-161
Identities = 290/292 (99%)
Strand = Plus / Minus
Query: 1 tgatatataacaaaaagccctaagtcgtacttgacagcagtcagtcagtgctggctactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tgatatataacaaaaagccctaagtcgtacttgacagcagtcagtcagtgctggctactg 244
Query: 61 ttatgatacaaactcgacctagatgtaaaaagccatgggaggagggggtgagaggtagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ttatgatacaaactcgacctagatgtaaaaagccatgggaggagggggtgagaggtagtt 184
Query: 121 cagtggacaaaaatgtttgttggacaagtgtaagcatctgagttcaaacccccaggatcc 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 183 cagtggacaaaaatgtttgttggacaagtgtaagcatctgagttcaaatccccaggatcc 124
Query: 181 ttgtgaaagccagagatgtcctgtggtggggagcatctgtgaccctcgcccttctgtggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ttgtgaaagccagagatgtcctgtggtggggagcatctgtgaccctcgcccttctgtggg 64
Query: 241 aaggtgagaggcagacaggagtcttgctggatgcttacagactagccagcct 292
||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 63 aaggtgagaggcagacaggagtcttgctggatgcttacagactagccggcct 12
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
