Query= MSMg01no266_n01.b1 MSMg01no266_n01.b1 CHROMAT_FILE:
MSMg01no266_n01.b1 PHD_FILE: MSMg01no266_n01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:42 2005
(532 letters)
>mm_chr9_29123806_29124737
Length = 932
Score = 1000 bits (517), Expect = 0.0
Identities = 528/532 (99%)
Strand = Plus / Minus
Query: 1 gatatcagatctctggttcccagctcttagagactctgccacctccatgtctggcgttgt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 558 gatatcagatctctggttcccagctcttagagactctgccacctccatgtctggtgttgt 499
Query: 61 ttctactttatttatttctaggctatacttcctgtggaggttccttcagtttatttacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ttctactttatttatttctaggctatacttcctgtggaggttccttcagtttatttacca 439
Query: 121 taaaccattttcccccagtggatttcagttctacaaatgaattgcagaggatatgactta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 taaaccattttcccccagtggatttcagttctacaaatgaattgcagaggatatgactta 379
Query: 181 aatatggaaaatgttcaggctaaatgtgtacatgtgcatttttcatattaacatgcctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aatatggaaaatgttcaggctaaatgtgtacatgtgcatttttcatattaacatgcctct 319
Query: 241 gtatcctattgtgtggcataattttatcccattctccactgggctaatgatatgttcctt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 318 gtatcctattgtgtggcataattttatcccattctccactgggctaatgataggctcctt 259
Query: 301 cacacatttataaaagtctgctttggtctttcctctctatttcattattcattcgtttat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 cacacatttataaaagtctgctttggtctttcctctctatttcattattcattcgtttat 199
Query: 361 tctctcattcaatgcaccgagtttagactctccactgagtgccacactggtgcctgggga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tctctcattcaatgcaccgagtttagactctccactgagtgccacactggtgcctgggga 139
Query: 421 catggagataaataagaaacagttgctgtcctcttggaattcataaacaaatagggcaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 catggagataaataagaaacagttgctgtcctcttggaattcataaacaaatagggcaga 79
Query: 481 aaaatataatcaattgcttactaaacattgtgtgtggntgtgtgtgtgtgtg 532
||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 78 aaaatataatcaattgcttactaaacattgtgtgtgggtgtgtgtgtgtgtg 27
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 932
Length adjustment: 10
Effective length of query: 522
Effective length of database: 922
Effective search space: 481284
Effective search space used: 481284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no266_n01.g1 MSMg01no266_n01.g1 CHROMAT_FILE:
MSMg01no266_n01.g1 PHD_FILE: MSMg01no266_n01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:42 2005
(286 letters)
>mm_chr9_28971009_28971690
Length = 682
Score = 511 bits (264), Expect = e-149
Identities = 279/286 (97%), Gaps = 4/286 (1%)
Strand = Plus / Plus
Query: 1 catttactttctgccttaagccacgcagagagggcatgtgttttggacaaatttattctg 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 catttactttctgccttaagccacgcagagagggcatgtgttttggagaaatttattctg 260
Query: 61 ggaatctgaacacatgaggctgtggaccatcctggttctttctgggtacacagcctctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaatctgaacacatgaggctgtggaccatcctggttctttctgggtacacagcctctcc 320
Query: 121 ctgtttgtacatcctctggccaaaaaaacagctgtctgttgagtccctacatggaagaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgtttgtacatcctctggccaaaaaaacagctgtctgttgagtccctacatggaagaga 380
Query: 181 aggtggttccatatcagggacccaggataacagagcattaactgactgttctttcttctc 240
||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 381 aggtgattccatatcaggggcccaggataacagagcattaactg----ttctttcttctc 436
Query: 241 attctcttactctctgtctccaaaactccctttgtagcccatcttg 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 attctcttactctctgtctccaaaactccctttgtagcccatcttg 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 682
Length adjustment: 9
Effective length of query: 277
Effective length of database: 673
Effective search space: 186421
Effective search space used: 186421
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
