Query= MSMg01no269_i10.b1 MSMg01no269_i10.b1 CHROMAT_FILE:
MSMg01no269_i10.b1 PHD_FILE: MSMg01no269_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:01 2005
(237 letters)
>mm_chr9_57534114_57534750
Length = 637
Score = 443 bits (229), Expect = e-129
Identities = 235/237 (99%)
Strand = Plus / Minus
Query: 1 gccataagctttactcaataagaaagaagaaaacgaatttgtataaaacctagcctaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gccataagctttactcaataagaaagaagaaaacgaatttgtataaaacctagcctaatt 345
Query: 61 ttcagattgacccttttaattgagtgagctgaacccagtaagacaggagatggtgcgcct 120
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 344 ttcagattgacccttttaattgattgagctgaacccagtaagacaggaaatggtgcgcct 285
Query: 121 tccttcccagctgccttcaaacagctttgtgagtctgttggagtcttcatccttaacact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tccttcccagctgccttcaaacagctttgtgagtctgttggagtcttcatccttaacact 225
Query: 181 tgcagaagttaatcctgaagcttagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 tgcagaagttaatcctgaagcttagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 168
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no269_i10.g1 MSMg01no269_i10.g1 CHROMAT_FILE:
MSMg01no269_i10.g1 PHD_FILE: MSMg01no269_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:01 2005
(198 letters)
>mm_chr9_57391842_57392439
Length = 598
Score = 354 bits (183), Expect = e-102
Identities = 196/203 (96%), Gaps = 5/203 (2%)
Strand = Plus / Plus
Query: 1 cataccaaaggctgactggtcttcactctgtatcctcaacacaagtgatctttaattact 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cataccaaaggctgactgctcttcactctgtatcctcaacacaagtgatctttaattact 260
Query: 61 ttgacggagctagagggaatacgcttcattagtccactggcctaccccttcccttccttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgacggagctagagggaatacgcttcattagtccactggcctaccccttcccttccttc 320
Query: 121 ccttcccttcccttc-----tctgcagctgagagcatgctgagctaatgctgggggatgc 175
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccttcccttcccttcccttctctgcagctgagagcatgctgagctaatgctgggggatgc 380
Query: 176 atgctttgttagactaacacctc 198
|||||||||||| ||||||||||
Sbjct: 381 atgctttgttagcctaacacctc 403
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 198
Length of database: 598
Length adjustment: 8
Effective length of query: 190
Effective length of database: 590
Effective search space: 112100
Effective search space used: 112100
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
