Query= MSMg01no271_d03.b1 MSMg01no271_d03.b1 CHROMAT_FILE:
MSMg01no271_d03.b1 PHD_FILE: MSMg01no271_d03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:01 2005
(673 letters)
>mm_chr9_80909392_80910463
Length = 1072
Score = 578 bits (299), Expect = e-169
Identities = 325/335 (97%), Gaps = 4/335 (1%)
Strand = Plus / Minus
Query: 5 gaattcaaaccagtatcgagagaaagaggagcctctgagtattgtctgaaactaccctct 64
|||||||||| || || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gaattcaaacaag-atggagagaaagaggagcctctgagtattgtctgaaactaccctct 276
Query: 65 atgagatcataatttggtaacatgtaccttcctgttacaatgttaatagaaataaatatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 atgagatcataatttggtaacatgtaccttcctgttacaatgttaatagaaataaatatt 216
Query: 125 tttgtaagatatttttaaatatttttattaggtattttcctcatttacatttccaatgct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 tttgtaagatatttttaaatatttttattaggtattttcctcatttacatttccaatgct 156
Query: 185 atcccaaaagtcccccataccct---cccccccccaatcccctaccgacccactcccact 241
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 155 atcccaaaagtcccccataccctccccccccccccaatcccctacccacccactcccact 96
Query: 242 ttttggccctggcattcccctgtactggggcatataaagtttgcaagtccaatgggcctc 301
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 95 ttttggccctggcattcccctgtattggggcatataaagtttgcaagtccaatgggcctc 36
Query: 302 tctttccagtaatggcggactaggccatcttttga 336
|||||||||| ||||| ||||||||||||||||||
Sbjct: 35 tctttccagtgatggccgactaggccatcttttga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1072
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1062
Effective search space: 704106
Effective search space used: 704106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no271_d03.g1 MSMg01no271_d03.g1 CHROMAT_FILE:
MSMg01no271_d03.g1 PHD_FILE: MSMg01no271_d03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:01 2005
(291 letters)
>mm_chr9_80758771_80759462
Length = 692
Score = 545 bits (282), Expect = e-160
Identities = 288/290 (99%), Gaps = 1/290 (0%)
Strand = Plus / Plus
Query: 1 attagaaagcatgagaggatatttgaataaacaaaagaacaaagctctcttgcaagcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attagaaagcatgagaggatatttgaataaacaaaagaacaaagctctcttgcaagcctg 260
Query: 61 cactggatggaagtcagtaggttgctaaaacttagatgcttattttcctagtttaatggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cactggatggaagtcagtaggttgctaaaacttagatgcttattttcctagtttaatggc 320
Query: 121 ccattctgcctgactttatactctcaggatttggtgattttatactggctttactttttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccattctgcctgactttatactctcaggatttggtgattttatactggctttactttttt 380
Query: 181 cttttttggggt-ccagaacacttttattaaatagtacaataaattatgactttaaaaat 239
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttttttggggggccagaacacttttattaaatagtacaataaattatgactttaaaaat 440
Query: 240 ttaaaagctatttgattattttcagagtaaaaccactcaatttctttttt 289
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttaaaagctatttgattattttcagagtaaaaccactcaatttctttttt 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 692
Length adjustment: 9
Effective length of query: 282
Effective length of database: 683
Effective search space: 192606
Effective search space used: 192606
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
