Query= MSMg01no274_m02.b1 MSMg01no274_m02.b1 CHROMAT_FILE:
MSMg01no274_m02.b1 PHD_FILE: MSMg01no274_m02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:21 2005
(314 letters)
>mm_chr9_120943430_120944142
Length = 713
Score = 576 bits (298), Expect = e-169
Identities = 310/314 (98%), Gaps = 1/314 (0%)
Strand = Plus / Minus
Query: 1 tcttgaactgggaagttcagccttaatttagctgatgtttttagtttattttggcatggc 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 333 tcttgaactgggaagttcagccttaatttagctgatgtttttagttta-tttggcatggc 275
Query: 61 cgtatgattccgttgtctctccgttggcataggtaaaaattaaattccttggtgtgtgca 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 catatgattccgttgtctctccgttggcataggtaaaaattaaattccttggtgtgtgca 215
Query: 121 ccggggaggaggcctgtgtgcccatgtggaggctggaattgatgctggatgtcttactct 180
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 214 ccggggaggaggcctgtgtgtccatgtggaggctggaattgatgctggatgtcttacttt 155
Query: 181 gttgctctcttgagacagcctctcgctgaacctggaactcactgtttcctaccaccccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 gttgctctcttgagacagcctctcgctgaacctggaactcactgtttcctaccaccccca 95
Query: 241 tcgtctacctcagcaccagcactgaggtcatgggcacatactgccattcccagtttctgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 tcgtctacctcagcaccagcactgaggtcatgggcacatactgccattcccagtttctgc 35
Query: 301 actggggaatgcca 314
||||||||||||||
Sbjct: 34 actggggaatgcca 21
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 713
Length adjustment: 9
Effective length of query: 305
Effective length of database: 704
Effective search space: 214720
Effective search space used: 214720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no274_m02.g1 MSMg01no274_m02.g1 CHROMAT_FILE:
MSMg01no274_m02.g1 PHD_FILE: MSMg01no274_m02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:21 2005
(285 letters)
>mm_chr9_120784284_120784968
Length = 685
Score = 528 bits (273), Expect = e-154
Identities = 282/285 (98%)
Strand = Plus / Plus
Query: 1 caggaagagttctctgcaatgcctgccagtccttgcctgcttgcttctcctccctacctt 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 caggaagagttctctgcaatgcctgccagtccttgcctgcttgcttcccctccctacctt 260
Query: 61 tggcttggtgcatggagtgccttctgttaggacagtgatggaaagtaatgagtgtctgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggcttggtgcatggagtgccttctgttaggacagtgatggaaagtaatgagtgtctgga 320
Query: 121 cagtgagctccacaatgcaaagttctacctccctccgcttgagtgtgtggaaaggcacca 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 321 cagtgagctccacaatgcaaagttctacctccctccgcttgagtatgtggaaaggcacca 380
Query: 181 gccactggacaagataactggctgtgagtttccagcttcctgaatcatcagaacattctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gccactggacaagataactggctgtgagtttccagcttcctgaatcatcagaacattctg 440
Query: 241 gatcacaagaacatggctgagttttctacaatatacctcagcgtc 285
||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 441 gatcacaagaacatggctgagctttctacaatatacctcagcgtc 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
