Query= MSMg01no276_h09.b1 MSMg01no276_h09.b1 CHROMAT_FILE:
MSMg01no276_h09.b1 PHD_FILE: MSMg01no276_h09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:24 2005
(236 letters)
>mm_chr9_63010076_63010711
Length = 636
Score = 406 bits (210), Expect = e-118
Identities = 227/236 (96%), Gaps = 6/236 (2%)
Strand = Plus / Minus
Query: 1 ttccagcactcgggaggcagaggcaggcggagttcgaggccagcctggtctacagagtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ttccagcactcgggaggcagaggcaggcggagttcgaggccagcctggtctacagagtga 485
Query: 61 gttccaggtcagccagggctatacagagaaaccctgtctcgaaaaaccaaaaaaaaaaaa 120
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 484 gttccaggtcagccagggctatacagagaaaccctgtctcgaaaaacc------aaaaaa 431
Query: 121 aaggaattcaaggtcatctttttaaaaatcagcctggactgtatgagactttatctcacc 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 430 aaggaattcaaggtcatctttttaaaaatcagcctggactatatgagactttatctcacc 371
Query: 181 accatctccacaatccccccttccccaaaaaaaggccaatgatacaggaggggact 236
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 370 accatctccacaatccccccaaccccaaaaaaaggccaatgatacaggaggggact 315
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no276_h09.g1 MSMg01no276_h09.g1 CHROMAT_FILE:
MSMg01no276_h09.g1 PHD_FILE: MSMg01no276_h09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:24 2005
(232 letters)
>mm_chr9_62852009_62852640
Length = 632
Score = 426 bits (220), Expect = e-124
Identities = 226/228 (99%)
Strand = Plus / Plus
Query: 1 tcccaaagtcagcctagctctcccgcaagacgtgccgtgagctccctctccttcttagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcccaaagtcagcctagctctcccgcaagacgtgccgtgagctccctctccttcttagct 260
Query: 61 tgggcagaccagtgagaaattaatgaatttagaagtgacccaaaccctgaaccaactgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggcagaccagtgagaaattaatgaatttagaagtgacccaaaccctgaaccaactgcc 320
Query: 121 ctaaggatgcccgagatgcatcagttgtagacattcatggagaatgataggagagacaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctaaggatgcccgagatgcatcagttgtagacattcatggagaatgataggagagacaca 380
Query: 181 gttattcacagcaaactgtctttgattagaactatcccaccctgtcac 228
|||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 381 gttattcacagcaaacagtctttgattagatctatcccaccctgtcac 428
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 632
Length adjustment: 9
Effective length of query: 223
Effective length of database: 623
Effective search space: 138929
Effective search space used: 138929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
