Query= MSMg01no277_a24.b1 MSMg01no277_a24.b1 CHROMAT_FILE:
MSMg01no277_a24.b1 PHD_FILE: MSMg01no277_a24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:08 2005
(239 letters)
>mm_chr9_3922870_3923508
Length = 639
Score = 447 bits (231), Expect = e-130
Identities = 237/239 (99%)
Strand = Plus / Minus
Query: 1 gataaacaaaacatatggatcaagccaatgttgctggctactcactggtgtgttctgaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gataaacaaaacatatggatcaagccaatgttgctggctactcactggtgtgttctgaac 380
Query: 61 acagaatgatacaatagcagtttccccaaagacttgctccaaacaacctcaaatttggtt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ccagaatgatacaatagcagtttccccaaagacttgctccaaacaacctcaaatttggtt 320
Query: 121 gttgaatcaggtactccatttttcttcaaatgatccccctcttacaggagaaaagaaagc 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 319 gttgaatcaggtactccatttttcttcaaatgacccccctcttacaggagaaaagaaagc 260
Query: 181 cagaaatatcagatattgttagggttaactcaatggcagttcaggtcaaagataaattc 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 cagaaatatcagatattgttagggttaactcaatggcagttcaggtcaaagataaattc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no277_a24.g1 MSMg01no277_a24.g1 CHROMAT_FILE:
MSMg01no277_a24.g1 PHD_FILE: MSMg01no277_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:08 2005
(292 letters)
>mm_chr9_3820947_3821638
Length = 692
Score = 555 bits (287), Expect = e-162
Identities = 290/291 (99%)
Strand = Plus / Plus
Query: 1 accttggttgaagtgcatgatggctcaaacatatctgcaaaccacatagtacctaggaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 accttggttgaagtgcatgatggctcaaacatatctgcaaaccacatagtatctaggaag 260
Query: 61 cagagaggcaggcaaagggggagagtgtgagaaaggatgtatcctgcaagtatattttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagagaggcaggcaaagggggagagtgtgagaaaggatgtatcctgcaagtatattttac 320
Query: 121 aataggctttcaatactttttcaatgaactgtcattgactcaagatacaatcatttttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aataggctttcaatactttttcaatgaactgtcattgactcaagatacaatcatttttca 380
Query: 181 ataattagattgatcaactttggaaagatcaaactctgaacaagaaatctggaggacatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataattagattgatcaactttggaaagatcaaactctgaacaagaaatctggaggacatt 440
Query: 241 tcctttctaagcctgtggtggtttgaatatgcttagcccttgggaagtgct 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcctttctaagcctgtggtggtttgaatatgcttagcccttgggaagtgct 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
