Query= MSMg01no277_j02.b1 MSMg01no277_j02.b1 CHROMAT_FILE:
MSMg01no277_j02.b1 PHD_FILE: MSMg01no277_j02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:44 2005
(184 letters)
>mm_chr9_101231525_101232108
Length = 584
Score = 333 bits (172), Expect = 5e-96
Identities = 178/180 (98%)
Strand = Plus / Minus
Query: 1 acttcaagcccatccgtttgctcactgttacctgctctggttacaagtttaccgaggaag 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 acttcaagcctatccgtttgctcactgttacctgctctggttacaagtttaccgaggaag 321
Query: 61 agggctgaaatgattaattaatgtgaagtttggagactgcctgggaagctcatttgttca 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 320 agggctgaaatgattaattaatgtgaagtttggagactgcctaggaagctcatttgttca 261
Query: 121 agctcatctttcctcctgaaatcatctgtacaatacagtgcattggccttgggattaggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agctcatctttcctcctgaaatcatctgtacaatacagtgcattggccttgggattaggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 184
Length of database: 584
Length adjustment: 8
Effective length of query: 176
Effective length of database: 576
Effective search space: 101376
Effective search space used: 101376
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no277_j02.g1 MSMg01no277_j02.g1 CHROMAT_FILE:
MSMg01no277_j02.g1 PHD_FILE: MSMg01no277_j02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:44 2005
(547 letters)
>mm_chr9_101061228_101062173
Length = 946
Score = 1019 bits (527), Expect = 0.0
Identities = 542/547 (99%), Gaps = 2/547 (0%)
Strand = Plus / Plus
Query: 1 agaagagggcagtggatccccctggagctggagtcacaggtagttgtgagctgcccacac 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 202 agaagagggcagtggatccccctggagctggagtcacaggtagttgtgagatgcccacac 261
Query: 61 gggtcctgggaccaaactctggtccttaggaagagcagtacatgctctcaactatggaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gggtcctgggaccaaactctggtccttaggaagagcagtacatgctctcaactatggaga 321
Query: 121 tattttttctatcagtctttctaccttttggcagaattttaaatttttaggaatttaaaa 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tattttt-ctatcagtctttctaccttttggcagaattttaaatttttaggaatttaaaa 380
Query: 181 gttttatgtgatagagagatgactcggtgtaagaacacttgcagaggacctaagtttggt 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 gttttatgtgatagagagatgacttggtgtaagaacacttgcagaggacctaagtttggt 440
Query: 241 tcccagcacccacaagatggctcacaaccatctgatcctgggaatctgatatcctcttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcccagcacccacaagatggctcacaaccatctgatcctgggaatctgatatcctcttct 500
Query: 301 gatctctgtgacactaggcatacatgtggtacatatacatacatgtaggcaaagcagtca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gatctctgtgacactaggcatacatgtggtacatatacatacatgtaggcaaagcagtca 560
Query: 361 cgtatctaaaattaaaaaagaaacacataagtgtgttaggtgtgttctgttgtgagtctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cgtatctaaaattaaaaaagaaacacataagtgtgttaggtgtgttctgttgtgagtctt 620
Query: 421 tgctaagctgctttgtttgcagtgtaaaataacacacttgtgtcttccatctccccagtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgctaagctgctttgtttgcagtgtaaaataacacacttgtgtcttccatctccccagtt 680
Query: 481 gccacattctgaggctcaacttgatagcagatgtattggttcgttcattactgaagttgg 540
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 681 gccacattctgaggctcaacttgatagcagatgtattgtttc-ttcattactgaagttgg 739
Query: 541 gctacca 547
|||||||
Sbjct: 740 gctacca 746
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 946
Length adjustment: 10
Effective length of query: 537
Effective length of database: 936
Effective search space: 502632
Effective search space used: 502632
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
