Query= MSMg01no278_l18.b1 MSMg01no278_l18.b1 CHROMAT_FILE:
MSMg01no278_l18.b1 PHD_FILE: MSMg01no278_l18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:09 2005
(312 letters)
>mm_chr9_77178373_77179081
Length = 709
Score = 528 bits (273), Expect = e-154
Identities = 299/309 (96%), Gaps = 3/309 (0%)
Strand = Plus / Minus
Query: 4 ggaattctttatacataattagttttggtgaatcccttcttgtacccatagcctcccttc 63
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 509 ggaattctttatacataattagttttagtgaatcccttcttgtacccatagcctcccttc 450
Query: 64 ctctatctctgttcaaactatctctgtccctagcaatcccttatatttttataacacatg 123
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ctctatctctgttcaaactatttctgtccctagcaatcccttatatttttataacacatg 390
Query: 124 tgttctgccatccccacctccttaaggcctctgtccccaccacaagccttcttctggctt 183
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 389 tgttctgccatccccacctccttaaggcctctgtccccaccacaagcctccttctggctt 330
Query: 184 ctaagtctctatagacattacagttgaaattaacaaatatttaaattcaaagctatgatt 243
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 329 ctaagtctctatagacattacagttgaaatgaacaaatatttaaatacaaagctatgatt 270
Query: 244 tacatatgagtgagaacatatagagtctcattattaagccaagggttatttggccttacc 303
|||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 269 tacatatgagagagaacatatagagtctcatta---agccaagggttatttggccttacc 213
Query: 304 tcactaagc 312
| |||||||
Sbjct: 212 ttactaagc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 709
Length adjustment: 9
Effective length of query: 303
Effective length of database: 700
Effective search space: 212100
Effective search space used: 212100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no278_l18.g1 MSMg01no278_l18.g1 CHROMAT_FILE:
MSMg01no278_l18.g1 PHD_FILE: MSMg01no278_l18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:09 2005
(297 letters)
>mm_chr9_76996264_76996959
Length = 696
Score = 553 bits (286), Expect = e-162
Identities = 292/294 (99%), Gaps = 1/294 (0%)
Strand = Plus / Plus
Query: 1 actgttttacatataccatcacaaaacccacaatactatgaaggagattctggctggcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgttttacatataccatcacaaaacccacaatactatgaaggagattctggctggcta 260
Query: 61 catatattgaagatcagtctagtaaactaggcttcatagctgtgaatgtgagccatacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catatattgaagatcagtctagtaaactaggcttcatagctgtgaatgtgagccatacct 320
Query: 121 tctggttcacaaacctcaatttaaaaaaaaaagacatatttaaactaacacatctatttt 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 tctggttcacaaacctcaatttaaaaaaaaa-gacatatttaaactaacacatctatttt 379
Query: 181 aaaaactgatgtgaaccaaaaaaaggaatttatgaatcaagaaaaaatttagcatatgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aaaaactgatgtgaaccaaaaaaaggaatttatgaatcaagaaaaaatttagcatatgtt 439
Query: 241 cagctatttcaaatcttctatacattttttaaaaataattgcaacctatttttg 294
|||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 440 cagctatttcaaatcttctatacattttttaaaaataattgcaacctaattttg 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 696
Length adjustment: 9
Effective length of query: 288
Effective length of database: 687
Effective search space: 197856
Effective search space used: 197856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
