Query= MSMg01no288_f10.b1 MSMg01no288_f10.b1 CHROMAT_FILE:
MSMg01no288_f10.b1 PHD_FILE: MSMg01no288_f10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:24 2005
(283 letters)
>mm_chr9_59421909_59422590
Length = 682
Score = 524 bits (271), Expect = e-153
Identities = 277/279 (99%), Gaps = 1/279 (0%)
Strand = Plus / Minus
Query: 5 gaattcccatccctatgacattatccaaagtgttttccagaatacaattcttcagaattg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gaattcccatccctatgacattatccaaagtgttttccagaatacaattcttcagaattg 423
Query: 65 gcaattgtgcccatggcgcgaacattacctcaaatgctaggctttcagtgctgaatctta 124
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gcaattgtgcccatggtg-gaacattacctcaaatgctaggctttcagtgctgaatctta 364
Query: 125 gtccttctcagacctcatctcattcatgacgtgcaatgtttcctccctctagtgttttta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gtccttctcagacctcatctcattcatgacgtgcaatgtttcctccctctagtgttttta 304
Query: 185 agtccttcccatcatctccaggggcaaacttgttcccaattacccactctagcatcatga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 agtccttcccatcatctccaggggcaaacttgttcccaattacccactctagcatcatga 244
Query: 245 caaataataggcttccgggaggggggttggtttggtttg 283
|||||||||||||||||||||||||||||||||||||||
Sbjct: 243 caaataataggcttccgggaggggggttggtttggtttg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 682
Length adjustment: 9
Effective length of query: 274
Effective length of database: 673
Effective search space: 184402
Effective search space used: 184402
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no288_f10.g1 MSMg01no288_f10.g1 CHROMAT_FILE:
MSMg01no288_f10.g1 PHD_FILE: MSMg01no288_f10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:24 2005
(303 letters)
>mm_chr9_59240782_59241484
Length = 703
Score = 549 bits (284), Expect = e-161
Identities = 290/292 (99%)
Strand = Plus / Plus
Query: 1 tggtactacagaccagcggtgtcagaacaggcttagtgcctccttgtttgtgtttgtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggtactacagaccagcggtgtcagaacaggcttagtgcctccttgtttgtgtttgtttt 260
Query: 61 aattgcatgagcactctagatggtaaagttttcagagttcattttatgcagggccagtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattgcatgagcactctagatggtaaagttttcagagttcattttatgcagggccagtct 320
Query: 121 cagtcctcaatgtactcccacagatctttttcatagccttcatgcacatgctgtaacaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagtcctcaatgtactcccacagatctttttcatagccttcatgcacatgctgtaacaaa 380
Query: 181 acccttcgtcgactctcacagtatctgtaatcaaagagagaaaaaaaacttgtcagactc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acccttcgtcgactctcacagtatctgtaatcaaagagagaaaaaaaacttgtcagactc 440
Query: 241 taaaagggaaagaggtattgatttttacaaaggactattcctagagtttgtc 292
| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 441 tgaaagggaaagaggtattgatttttacaaaggaccattcctagagtttgtc 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 303
Length of database: 703
Length adjustment: 9
Effective length of query: 294
Effective length of database: 694
Effective search space: 204036
Effective search space used: 204036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
