TTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAACAGATTTTACGAATACTTTATAAGAGAGGGGCTGGCCAGATGT
GTCAACCAGAGCCAACCAGTTTCCACATAATCTCCAAGCTACTGGCTTGG
AATAGGGAGGGACAAAGGTCAGTGCTAGGCCTGGTCACAGGGACTGAGAG
CTGCTGACTAAGGACTTGTGGAAGGATGTAATTACCTCCCTCCCATGAGG
CCCAGACCAAGGAGCCCCTACAGCTGAAAACAGTAATTACAGAGCTGAAC
AAGAGAGGACAGCCTGAAACTATCCCTTGAGGCACAGGAGGAAGGCAGCC
AGATGTGAAATCCTATTATCTGAAGATGCTACTGACTATGCAAGCCTGGG
TACTAGGACCCTCAACTGCCCCCTCCGCAAGATGGGGACAGTCTCCCCTC
ACCTGATCTCTACTAGAAAGCACTTTGCAGAGCACCACCTGGGGAGAAAT
CCTCTCAGTGTTACTGGTGACTGCTGTTATTCTCTAAGCCAGCCCTAGGC
AAGCGGGGGCTGAGTTGGGGTCAAAGAAGAGGCAACAAGAGAGTGGTTCG
TAGTAGATGGAGACAAAATCCTTCAGCTCCCCTCACTTTCTTTACCGAAG
TCCCCAAAGATAAGGGAGGTGGCCACACTGTCCCTCCAGGGTATGACATA
AGCCTCAACACAAGGTTAGCTGGATGCTGTGGCCACC

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCAGGACAGCCAGGGCTACACAGAG
AAATCCTGTCTCAAAAAACCAAAAACCCAAAACCAACAAGAACAACAACC
AGCACTGAGGCATTATCCATGCAAATATTAGCCACACCATTTAAAACACA
TATTTCATGATGTGCGTGTGAGAACAACATGGGAGTCAGTTCTCCATTTC
CATCACGTAGGTGCTAAGACTCAAACTCAGTCTTGGCCTCAGCCACCTTT
ACCGGTGGGCCATCTTGCCAGCCTCGCTACAATGTTGTTTTCTCATAGTA
ACTGTAAAAATAAAACTGTATTTACCACCCCCCCCATTTATGTCCAGCAA
CAGAGGCAATGTTAGATTTACCACCACCTGCAAAGTGACTGACACAGTCA
TTAAAAATAATTGAGAGGATGAAGCAGGAGAGTGGGAACCAGCCTGTGAT
ATGACAATTGTTTTCACAGAGTTGAATGCAAAATTGGATTTTTATAGCTG
TGTAAAAATGTTTTATGCATGCAGACAAGTGCCAGATGGGAACAAGGGAA
AATAAATGAGTTGATCTGTCCAGAAAGGAGATCATGATTGAATTTTCAGA
TTCATTTTTATTTCTTAGCATAGTTATGCTGTTTTCGCACAAATAACTTC
TGCATTTCATGTAGCAATAGATTGCATAAAGCAGCTGT

Query= MSMg01no288_k07.b1 MSMg01no288_k07.b1 CHROMAT_FILE:
MSMg01no288_k07.b1 PHD_FILE: MSMg01no288_k07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:46 2005
         (291 letters)



>mm_chr9_63516344_63517034
          Length = 691

 Score =  516 bits (267), Expect = e-151
 Identities = 285/291 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   taatctccaagctactggcttggaatagggagggacaaaggtcagtgctaggcctggtca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taatctccaagctactggcttggaatagggagggacaaaggtcagtgctaggcctggtca 260

                                                                       
Query: 61  cagggactgagagctgctgactaaggacttgtggaaggatgtaattacctccctcccatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagggactgagagctgctgactaaggacttgtggaaggatgtaattacctccctcccatg 320

                                                                       
Query: 121 aggcccagaccaaggagcccctacagctgaaaacagtaattacagagctgaacaagagag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggcccagaccaaggagcccctacagctgaaaacagtaattacagagctgaacaagagag 380

                                                                       
Query: 181 gacagcctgaaactatcccttgaggcacaggaggaaggcagccagatgtgaaatcctatt 240
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 381 gacagcctgaaactagcccttgaggcacaggaggaaggcagccagatgtgaaatcctaag 440

                                                              
Query: 241 atctgaagatgctactgactatgcaagcctgggtactaggaccctcaactg 291
           | ||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 441 acctgaagatgctcctgactatgcaagcctgggcactaggaccctcaactg 491


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space:   192324
Effective search space used:   192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no288_k07.g1 MSMg01no288_k07.g1 CHROMAT_FILE:
MSMg01no288_k07.g1 PHD_FILE: MSMg01no288_k07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:46 2005
         (303 letters)



>mm_chr9_63666716_63667418
          Length = 703

 Score =  578 bits (299), Expect = e-169
 Identities = 302/303 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgactgacacagtcattaaaaataattgagaggatgaagcaggagagtgggaaccagcct 60
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 503 tgactgacacagtcattaaaaataattgagaagatgaagcaggagagtgggaaccagcct 444

                                                                       
Query: 61  gtgatatgacaattgttttcacagagttgaatgcaaaattggatttttatagctgtgtaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gtgatatgacaattgttttcacagagttgaatgcaaaattggatttttatagctgtgtaa 384

                                                                       
Query: 121 aaatgttttatgcatgcagacaagtgccagatgggaacaagggaaaataaatgagttgat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aaatgttttatgcatgcagacaagtgccagatgggaacaagggaaaataaatgagttgat 324

                                                                       
Query: 181 ctgtccagaaaggagatcatgattgaattttcagattcatttttatttcttagcatagtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ctgtccagaaaggagatcatgattgaattttcagattcatttttatttcttagcatagtt 264

                                                                       
Query: 241 atgctgttttcgcacaaataacttctgcatttcatgtagcaatagattgcataaagcagc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atgctgttttcgcacaaataacttctgcatttcatgtagcaatagattgcataaagcagc 204

              
Query: 301 tgt 303
           |||
Sbjct: 203 tgt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 303
Length of database: 703
Length adjustment: 9
Effective length of query: 294
Effective length of database: 694
Effective search space:   204036
Effective search space used:   204036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)