Query= MSMg01no289_d23.b1 MSMg01no289_d23.b1 CHROMAT_FILE:
MSMg01no289_d23.b1 PHD_FILE: MSMg01no289_d23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:31 2005
(289 letters)
>mm_chr9_111252269_111252957
Length = 689
Score = 458 bits (237), Expect = e-133
Identities = 285/321 (88%), Gaps = 34/321 (10%)
Strand = Plus / Minus
Query: 1 caacttccaaaagttgtcttctatacatacacacacaccaataacaattagaaatt---- 56
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 686 caacttccaaaagttgtcttctatacatacacacacacaaataacaattagaaattatat 627
Query: 57 -----------atatatatatata-----------tatac----acacacacacatatat 90
||||||||||||| ||||| ||||||||||| ||||
Sbjct: 626 atatataaataatatatatatataatttctaattgtatacatatacacacacacacatat 567
Query: 91 atgcatatatatacatacatacacacacatacatacacacatgg----tgtttgtttgtt 146
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 566 atgcatatatatacatacatacacacacatacatacacacatggtgtttgtttgtttgtt 507
Query: 147 taaaataattaaataaaaacgttcctatttccagtgtggcttgctgtcagattcttggcc 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 taaaataattaaataaaaacgttcctatttccagtgtggcttgctgtcagattcttggcc 447
Query: 207 agcctggatcacaagtctgctcaggtgaccacctcactaggaaagcgccaccactcccgt 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 agcctggatcacaagtctgctcaggtgaccacctcactaggaaagcgccaccactcccgt 387
Query: 267 cacctccactccactgtctga 287
|||||||||||||||||||||
Sbjct: 386 cacctccactccactgtctga 366
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no289_d23.g1 MSMg01no289_d23.g1 CHROMAT_FILE:
MSMg01no289_d23.g1 PHD_FILE: MSMg01no289_d23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:31 2005
(294 letters)
>mm_chr9_111101269_111101962
Length = 694
Score = 553 bits (286), Expect = e-162
Identities = 292/294 (99%)
Strand = Plus / Plus
Query: 1 ttattattatttttttttaaaatctcaaaaaatagttgcttttctaaatgagtttttctt 60
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttattattatttttttaaaaaatctcaaaaaatagttgcttttctaaatgagtttttctt 260
Query: 61 tttatctcttaataagtcaaaggcaattgcaattatcaagttacttattgttttaaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttatctcttaataagtcaaaggcaattgcaattatcaagttacttattgttttaaaata 320
Query: 121 tctatacaatatcttaggtaaaagctttgtgaaatttcaggcactgtgcaatagctcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctatacaatatcttaggtaaaagctttgtgaaatttcaggcactgtgcaatagctcttc 380
Query: 181 agtgatttttgtatttatttaacaatgacccaaaaatggataattgctaggaagagtgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtgatttttgtatttatttaacaatgacccaaaaatggataattgctaggaagagtgtc 440
Query: 241 caacccatttagattagcattatgcacactgaggaaatactgaaaacagaaacc 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caacccatttagattagcattatgcacactgaggaaatactgaaaacagaaacc 494
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
