Query= MSMg01no290_a14.b1 MSMg01no290_a14.b1 CHROMAT_FILE:
MSMg01no290_a14.b1 PHD_FILE: MSMg01no290_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:28 2005
(574 letters)
>mm_chr9_28962481_28963454
Length = 974
Score = 955 bits (494), Expect = 0.0
Identities = 554/574 (96%)
Strand = Plus / Plus
Query: 1 tctccttcctatgtgcagttaagagcacttctgaacttcaggaaaagtgaacctcattaa 60
|||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 201 tctccttcctatgtgcagttcagagcacttctgaacttcaggaaaagtgaatatcattaa 260
Query: 61 agtgctccactcacctcatcctttgtagttacttgagcatttctggttagtcattttccc 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtgttccactcacctcatcctttgtagttacttgagcatttctggttagtcattttccc 320
Query: 121 cccactggaagttattctttcccatgtgtgcaaaccaggatttatcctgtctacttccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccactggaagttattctttcccatgtgtgcaaaccaggatttatcctgtctacttccct 380
Query: 181 ctggtctagaatttcagagtcctggtttcctaaaagaaagtatagttgtcagatagccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctggtctagaatttcagagtcctggtttcctaaaagaaagtatagttgtcagatagccaa 440
Query: 241 ccaccactgcctatcagggagagatggctataattgccttccaccgtcttcttctattgc 300
||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 441 ccaccactgcctagcagggagagacggctataattgccttccaccgtcttcttcgattgc 500
Query: 301 tgagtgttggaactccacatggggactgtgaaatgcatagcatactcctttgagttaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgagtgttggaactccacatggggactgtgaaatgcatagcatactcctttgagttaaga 560
Query: 361 tatctcctctccatctaatgtacccattgcagagacacctgaggtcaattatcttgcgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatctcctctccatctaatgtacccattgcagagacacctgaggtcaattatcttgcgta 620
Query: 421 taacataagaagcttctgaaagggtgtgtgacagcccaacttctgcctggatgggagtga 480
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 621 taacataagaagattctgaaagggtgtatgacagcccaacttctgcctggatgggagtga 680
Query: 481 actcaatagaaatgggcatattggctacttccacatgttatctaagaaacagaacagtca 540
|||| || ||||||| || || || ||||||||||||| |||||||||||||| |||||
Sbjct: 681 actcgattgaaatggacagatcagccacttccacatgttttctaagaaacagaatagtca 740
Query: 541 gacaagagtgtactggtacttgttaattaaagaa 574
||| |||||||||||||||||||||||||||||
Sbjct: 741 gaccggagtgtactggtacttgttaattaaagaa 774
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space: 543696
Effective search space used: 543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no290_a14.g1 MSMg01no290_a14.g1 CHROMAT_FILE:
MSMg01no290_a14.g1 PHD_FILE: MSMg01no290_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:28 2005
(536 letters)
>mm_chr9_29144896_29145831
Length = 936
Score = 917 bits (474), Expect = 0.0
Identities = 521/540 (96%), Gaps = 6/540 (1%)
Strand = Plus / Minus
Query: 3 aaaaaaaatccaacaacaaaaaattgtaaaagtcaataggtagcta------ctccagtt 56
|||||||||||||||||||||||||||||||| ||||||||||||| | ||||||
Sbjct: 790 aaaaaaaatccaacaacaaaaaattgtaaaagccaataggtagctaccccagccccagtt 731
Query: 57 ttcaaggttctctgaaaatggactgagatttcacatcatttcagaaaacaatgggaaact 116
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ttcaaggttctctgaatatggactgagatttcacatcatttcagaaaacaatgggaaacc 671
Query: 117 acctcaataatttacatatttactttgcaaatatctgttgaaccaatgcaatgttaccaa 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 acctcaataatttacatatttactttgcaaatatctgttgaaccaatgcaatgttaccaa 611
Query: 177 gcagctttgtgtgttctgggtatattaatagaaaggggttttaagaagttcttgagatag 236
|||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 610 gcagctttgtgtgttctgggtatattaatagaaaggggatttaagaggttcttgagatag 551
Query: 237 tctgtctgctgctaggaaaaaaggaagataagtacaatgcagagtgagcctttttaacag 296
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tctgtctgctgctcggaaaataggaagataagtacaatgcagagtgagcctttttaacag 491
Query: 297 aatgaaagcaagcattgaagagacattagaacaacaaagagtgagggctaatggacacag 356
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 490 aatgaaagcaagcattgaagagacagtagaacaacaaagagtgagggctaatggacacag 431
Query: 357 ccaatgttagtctgtgtggtccacgttcaggtcagattcccagcccttttggcaggtgtc 416
||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 430 ccaatgttagtctgtgtggtccacgttcacgtcagattcccaacccttttggcaggtgtc 371
Query: 417 ctttacacaattggtccttccttccattacttcacagagatgtagtcattctggatgtat 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ctttacacaattggtccttccttccattacttcacagagatgtagtcattctggatgtat 311
Query: 477 gtttggcgtgtgttataataaaataacttaatcctttaacaacttcattgatttttcttg 536
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 310 gtttggtgtgtgttataataaaatgacttaatcctttaacaacttcattgatttttcttg 251
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space: 487076
Effective search space used: 487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
