Query= MSMg01no290_j21.b1 MSMg01no290_j21.b1 CHROMAT_FILE:
MSMg01no290_j21.b1 PHD_FILE: MSMg01no290_j21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:14 2005
(339 letters)
>mm_chr5_90673090_90673828
Length = 739
Score = 449 bits (232), Expect = e-130
Identities = 232/232 (100%)
Strand = Plus / Plus
Query: 1 tgagtgcagtggcagtctgagatgtcgacgacagagctacagttgtcattttgatcccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgagtgcagtggcagtctgagatgtcgacgacagagctacagttgtcattttgatcccca 260
Query: 61 ttaaggaactgttagcagcagtggtggtaggtgctgaggacccgattttggaatttgctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaggaactgttagcagcagtggtggtaggtgctgaggacccgattttggaatttgctg 320
Query: 121 tggagcttttcaaacgattctttggaataagttcatcaatttctttgtctggatccttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggagcttttcaaacgattctttggaataagttcatcaatttctttgtctggatccttga 380
Query: 181 tcaaagcattgatcaactgagttgcttgtcttgttgattcagtgccacccct 232
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaaagcattgatcaactgagttgcttgtcttgttgattcagtgccacccct 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no290_j21.g1 MSMg01no290_j21.g1 CHROMAT_FILE:
MSMg01no290_j21.g1 PHD_FILE: MSMg01no290_j21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:14 2005
(653 letters)
>mm_chr9_82223778_82224830
Length = 1053
Score = 1162 bits (601), Expect = 0.0
Identities = 641/655 (97%), Gaps = 3/655 (0%)
Strand = Plus / Plus
Query: 1 acctaatcatgcttagacttgatgtaccagcatggggaaacag--cttggaatcaccctc 58
||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 200 acctaatcatgcttagacttgatgtaccagcatggggaaacagagcttggaat-accctc 258
Query: 59 tcaagaggacaaagcgaaagggagaggggaagacactgggggcggacccagaggagtgac 118
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 259 tcaagaggacaaagcgaaagggagaggggaagacactgggggcggacccagaggggtgac 318
Query: 119 agagtttgggatgtatataaataaagatattgagatatttttgtggcaactttttataga 178
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 319 agagtttgggatgtatataaataaagatattgagatatttttgcggcaactttttataga 378
Query: 179 attattatatcctctgagatactattcttgaagaaatcagtcctttaaggaaggaattat 238
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 379 attagtatatcctctgagatactattcttgaagaaatcagtcctttaaggaaggacttat 438
Query: 239 tactggaatgtattgtgggctttcttttcccattttttataatagagccaagaattgttg 298
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |
Sbjct: 439 tactggaatgtattgtgggctttcttttcccattctttataatagagcccagaattgcag 498
Query: 299 taaaagtcctctacacagataaattgaaagttctatggagttcaagagttgactacactg 358
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 caaaagtcctctacacagataaattgaaagttctatggagttcaagagttgactacactg 558
Query: 359 tgaaatgacaattggaattttagatatgtttttgcttcaaagatatattgacatcaagat 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tgaaatgacaattggaattttagatatgtttttgcttcaaagatatattgacatcaagat 618
Query: 419 cccttgaaagaataaaatcatccctttgaagtcacatttaatataccctatgtgatatag 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 cccttgaaagaataaaatcatccctttgaagtcacatttaatataccctatgtgatatag 678
Query: 479 attgtgtcatttgtacaagactttttaatttctgtctgaagtttcactgaacatcaacct 538
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 679 attgtgtcatttgtacaagacttttttatttctgtctgaagtttcactgaacatcaacct 738
Query: 539 taaccagaggctatgtcagactgtaaaagcgaagatgcatgacagctttaatgatggtta 598
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 taaccagaggccatgtcagactgtaaaagcgaagatgcatgacagctttaatgatggtta 798
Query: 599 aacttaaaggaagaaaaagtagcatgaagtaattttcctcacaggaagcaagata 653
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 aacttaaaggaagaaaaagtagcatgaagtaattttcctcacaggaagcaagata 853
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space: 670649
Effective search space used: 670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
