CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXCAGGGAATCCCACACCCTCTCTGACTTCAATGATATTGAG
CATTTTTCATGTATTTATTTGCCATTTGCTTTTTGCTTTGAGAGGTGTCT
GTTTAGATCGTTTGCTGATTTTAAAACTGGGTTAGATGGCCTTTAAAACA
GACATTTTTCAAAATATTTTCTAGCTTTTAGTCCTCTGTCAGACTGAGGC
AGATATTGGCTGGCAGATATTATCTTCCATTCCGTATGGTTTTTTTGGTG
CTGTTGAAGGTTTCTGTTTTGTTGGCGTTTTTTTGGGTGTTGGCCACCGA
CATGGAAGTCTCGTATCTGCACCAACCAGCACGGAGCTGCATCCACAGCC
TGGAGGCGGCCACCGCTGTGTTCATTGTCAGGTGGAGCCTTTTGAGTTTA
TTGCAGTCAGTCAGGGTTTAAGCCTTAATTTCCCGGGGCTTTTGGAAAGC
CCAATCCCACGAAAACAAGGTTTTGCCGTGGCCCCCACAGGGGGGTTGAA
AAAAAAAATCCCCTCCCCCCGGGGTGGGTTTTTTCCCCCCCCCCCCCACC
AGTTATTTTAATAATATAATTCTTTTTTCTTATNTTTTCTTTATCACCCT
CCTCCTGAGCTAANTCTTTTTTGATTGCTG

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCACTTGTGAGGCATTCTTTTCTTA
ACAGTGCTCACTCCCCTGATGTCTACATCAATATCCTTTATAGATTTGCA
TGTATGTGGCCAAAGGAATACCTTCATTGTTTCCTTAAAGGCATAGAGAA
CAGGTAATAGGTGCCACTCCTTTTTCCCTTTGTGTTTTATCACTTTGGCA
AGTTACTGGAAGATGGCTGTTATGGCCGAAGGGCTTTTGCTTTAATTTTT
AAGAAGTAATACTATAGCTAAGTACATTATTATTATAGTAATACTATAGC
TAAGTACACTATTATTATAGTAATACTATAGCTAAGTACATTACTATGCT
GACACACATACACACACACACTGAACTTTGTCTTCTTATGTGGATAACTA
TGACTTGGGGGAGGTTTCTTAATCATTATGTGATCTATTATTGTGAAAGG
TGAGGGAAATTGATATTTTTCAGTTTTAAGCTTGTAGTATATGAAATATA
CTCTGTACTAAATTGCTTTAGGAAAATACTTTTGAGTACAGGACAGCCAG
CCACAGCTGGCTCAAAACCTCCACCCATCCGTTCATCCAAGAAAAGCGAG
AAAAGAAAAATACTTTCAGAAAATAATTTTGTTTTCTTTAAGTTGCTTGT
GGGGGAGCTGGGGTGAAGCTGCAGCAGAGTGTTTGATGAATAGTGAGGGN

Query= MSMg01no293_f04.g1 MSMg01no293_f04.g1 CHROMAT_FILE:
MSMg01no293_f04.g1 PHD_FILE: MSMg01no293_f04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:42 2005
         (616 letters)



>mm_chr9_59732846_59733860
          Length = 1015

 Score =  909 bits (470), Expect = 0.0
 Identities = 548/616 (88%), Gaps = 65/616 (10%)
 Strand = Plus / Plus

                                                                       
Query: 1   cacttgtgaggcattcttttcttaacagtgctcactcccctgatgtctacatcaatatcc 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 cacttgtgaggcattcttttcttaacagtgctcactcccctgatgtctgcatcaatatcc 260

                                                                       
Query: 61  tttatagatttgcatgtatgtggccaaaggaataccttcattgtttccttaaaggcatag 120
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 tttatagatttgcatgtatgtggccaaaggaataccttcat-gtttccttaaaggcatag 319

                                                                       
Query: 121 agaacaggtaataggtgccactcctttttccctttgtgttttatcactttggcaagttac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agaacaggtaataggtgccactcctttttccctttgtgttttatcactttggcaagttac 379

                                                                       
Query: 181 tggaagatggctgttatggccgaagggcttttgctttaatttttaagaagtaatactata 240
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 380 tggaagatggctgttatggccgaagtgcttttgctttaatttttaagaagtaatactata 439

                                                                       
Query: 241 gctaagtacattattattatagtaatactatagctaagtacactattattatagtaatac 300
           |||||||||||||                                               
Sbjct: 440 gctaagtacatta----------------------------------------------- 452

                                                                       
Query: 301 tatagctaagtacattactatgctgacacacatacacacacacactgaactttgtcttct 360
                            |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 -----------------ctatgctgacacacatacacacacacactgaactttgtcttct 495

                                                                       
Query: 361 tatgtggataactatgacttgggggaggtttcttaatcattatgtgatctattattgtga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tatgtggataactatgacttgggggaggtttcttaatcattatgtgatctattattgtga 555

                                                                       
Query: 421 aaggtgagggaaattgatatttttcagttttaagcttgtagtatatgaaatatactctgt 480
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 556 aaggtgagggaaattgatatttttcagttttaagcttgtagtatatgtaatatactctgt 615

                                                                       
Query: 481 actaaattgctttaggaaaatacttttgagtacaggacagccagccacagctggctcaaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 actaaattgctttaggaaaatacttttgagtacaggacagccagccacagctggctcaaa 675

                                                                       
Query: 541 acctccacccatccgttcatccaagaaaagcgagaaaagaaaaatactttcagaaaataa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 acctccacccatccgttcatccaagaaaagcgagaaaagaaaaatactttcagaaaataa 735

                           
Query: 601 ttttgttttctttaag 616
           ||||||||||||||||
Sbjct: 736 ttttgttttctttaag 751


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1015
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1005
Effective search space:   609030
Effective search space used:   609030
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)