Query= MSMg01no294_l16.b1 MSMg01no294_l16.b1 CHROMAT_FILE:
MSMg01no294_l16.b1 PHD_FILE: MSMg01no294_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:28 2005
(323 letters)
>mm_chr9_49220034_49220754
Length = 721
Score = 555 bits (287), Expect = e-162
Identities = 309/317 (97%), Gaps = 2/317 (0%)
Strand = Plus / Plus
Query: 4 ggaattccaatttcccatcacagcatccagcttccccattgcacacagctccctggaatc 63
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 204 ggaattccaatttcccatcacagcatccagcttccccattgcacacagttccctggaatc 263
Query: 64 tttaggatgcactggacaatcagactctatctgccctctgcttggaaagggggagggggg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 264 tttaggatgcactggacaatcagactctatctgccctctgcttggaaagggggcgggtgg 323
Query: 124 gggaggctcttctcattctctcacagtgaggcaaagctccaggctcaggatggacattag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gggaggctcttctcattctctcacagtgaggcaaagctccaggctcaggatggacattag 383
Query: 184 agtttcccaactggaaacccatcacactgtctgcccatagaaataagctgtccctcccac 243
|||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 384 agtttcccgactggaaac--atcacactgtctgaccatagaaataagctgtccctcccac 441
Query: 244 attctggagctgatggaatacctcttatgctagcctctggcccttctgagctccatccac 303
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 442 attctggagctgatggaatacctcttatgctagcctctggtccttctgagctccatccac 501
Query: 304 gtcgcctccaacattta 320
|||||||||||||||||
Sbjct: 502 gtcgcctccaacattta 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 721
Length adjustment: 9
Effective length of query: 314
Effective length of database: 712
Effective search space: 223568
Effective search space used: 223568
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no294_l16.g1 MSMg01no294_l16.g1 CHROMAT_FILE:
MSMg01no294_l16.g1 PHD_FILE: MSMg01no294_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:28 2005
(297 letters)
>mm_chr9_49379856_49380551
Length = 696
Score = 549 bits (284), Expect = e-161
Identities = 294/298 (98%), Gaps = 3/298 (1%)
Strand = Plus / Minus
Query: 1 ctttgaaattcgcatttctctttctctcc-gttgttgtccatagatagatcctggcagca 59
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 496 ctttgaaattcgcatttctctttctctcctgttgttgtccatagatagatcctggcagca 437
Query: 60 tttgggaatgaaagctcttcagcttgactcccccctgagagtcatgttcttttgtgaaag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tttgggaatgaaagctcttcagcttgactcccccctgagagtcatgttcttttgtgaaag 377
Query: 120 gagctttaaaaaaaaaaagaaagaaaaaggaaaagtgaaggctgttttttcacttagaat 179
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gagcttt--aaaaaaaaagaaagaaaaaggaaaagtgaaggctgttttttcacttagaat 319
Query: 180 aaggatatgctccagcagtgagagcattgaagtaacaggatccatatgttggagctgaga 239
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 aaggatattctccagcagtgagagcattgaagtaacaggatccatatgttggagctgaga 259
Query: 240 gctaatgctcagcatatgggcagtgaactttgcagacagaaggatgtctctgctttta 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gctaatgctcagcatatgggcagtgaactttgcagacagaaggatgtctctgctttta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 696
Length adjustment: 9
Effective length of query: 288
Effective length of database: 687
Effective search space: 197856
Effective search space used: 197856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
