Query= MSMg01no298_a15.b1 MSMg01no298_a15.b1 CHROMAT_FILE:
MSMg01no298_a15.b1 PHD_FILE: MSMg01no298_a15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:38 2005
(626 letters)
>mm_chr9_37417119_37418145
Length = 1027
Score = 1137 bits (588), Expect = 0.0
Identities = 615/624 (98%), Gaps = 1/624 (0%)
Strand = Plus / Minus
Query: 4 gaattcccttgcctcc-cttttcatgggtggctagtagtcttcatttttgtgacaggaaa 62
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 gaattcccttgccaccgtttttcatgggtggctagtagtcttcatttttgtgacaggaaa 731
Query: 63 cctgtgactatacagtgtaagtggtagctcaagtcattaggagaaaatggacttcttaaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 cctgtgactatacagtgtaagtggtagctcaagtcattaggagaaaatggacttcttaaa 671
Query: 123 tagtattgagatcaaaataagaaaacaaaattgtatcaatactttatatcatagccccag 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 tagtattgagatcaaaataagaaaacaaaattgtatcaatactttatatcatagccccag 611
Query: 183 ataaataataagttgattccagatttaaatactaagaaagaaaccatataaatgctggga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ataaataataagttgattccagatttaaatactaagaaagaaaccatataaatgctggga 551
Query: 243 ggtacttcatcccttaagaaaaacatcttgcttgtcaagttgcttcaaactcaaaggcaa 302
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 550 ggtacttcatcccttaagaaaaacatcttgcttgccaagttgcttcaaactcaaaggcaa 491
Query: 303 cacggttgaaggaacagattgatggaactgacagcgtaagaagtcagcttgtgtgtgaca 362
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 490 cacggttgaaggaacagattgatggaactgacagcataagaagtcagcttgtgtgtaaca 431
Query: 363 aagcagcatgaagaaaacaaaataacaaactgagaaaaatgcttgcagttcacgtcccag 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 aagcagcatgaagaaaacaaaataacaaactgagaaaaatgcttgcagttcacgtcccag 371
Query: 423 cagcccagtgagttaataagcctaataaatagcttgtaaaaatcatgtgttaaacgcctt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 cagcccagtgagttaataagcctaataaatagcttgtaaaaatcatgtgttaaacgcctt 311
Query: 483 tatgtcaagagataacggttcacacaaaaataaacacagatagctcttaacatgaaaagc 542
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 310 tatgtcaagagataacggttcacacaaaaattaacacagatagctcttaacatgaaaagc 251
Query: 543 taccccaactatcccataataacaattccaatcaaaattgggcatatagagatggcttag 602
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 250 taccccaactatcccataataacaattccaatcaaaattgggcatatagagatagcttcg 191
Query: 603 gggataagagcacttctgctcttc 626
||||||||||||||||||||||||
Sbjct: 190 gggataagagcacttctgctcttc 167
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1027
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1017
Effective search space: 626472
Effective search space used: 626472
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no298_a15.g1 MSMg01no298_a15.g1 CHROMAT_FILE:
MSMg01no298_a15.g1 PHD_FILE: MSMg01no298_a15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:38 2005
(246 letters)
>mm_chr9_37262327_37262972
Length = 646
Score = 453 bits (234), Expect = e-132
Identities = 243/246 (98%)
Strand = Plus / Plus
Query: 1 aatgcagaatcccacaggagagagatcgttcggggacatgggggacaaggggaggtgact 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 aatgcagaatcccacaggagagagatcgttcggggagatgggggacaaggggaggtgact 260
Query: 61 aggaaggaccaaagtcaggtgcctcccatctcacccatcacctctcctgggctaattgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggaaggaccaaagtcaggtgcctcccatctcacccatcacctctcctgggctaattgat 320
Query: 121 tccagacatgaataaggggctctcacatgggtcttgaagggccctggccctgctctggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccagacatgaataaggggctctcacatgggtcttgaagggccctggccctgctctggca 380
Query: 181 tttcggatgttctccctgtgggagggcccaaccccctcccccacactcctcttccaggag 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 381 tttcggatgttctccctgtgggagggcccaaccccctctcccacactcctcttccagaag 440
Query: 241 taagcc 246
||||||
Sbjct: 441 taagcc 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
