Query= MSMg01no298_o19.b1 MSMg01no298_o19.b1 CHROMAT_FILE:
MSMg01no298_o19.b1 PHD_FILE: MSMg01no298_o19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:42 2005
(399 letters)
>mm_chr9_87933358_87934156
Length = 799
Score = 563 bits (291), Expect = e-165
Identities = 325/341 (95%), Gaps = 9/341 (2%)
Strand = Plus / Minus
Query: 3 tcaagaaaccatggattaaaaaccatgaaaccatgaaacatcttttttcatctttttttc 62
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tcaagaaaccatggattaaaacccatgaaaccatgaaacatcttttttcatctttttttc 275
Query: 63 ttttaagtttacttttcccaggtattttgttgaagcaatataaaactgaccaaaacaact 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 274 ttttaagtttacttttcccaggtattttgttgaagcaatataaaactgaccaaaacagct 215
Query: 123 tagaaagaggagagatgagacatataacatcacccaccctgaaaactcattgaccatcag 182
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 tagaaagaggagagatgaggcatataacatcacccaccctgaaaactcattgaccatcag 155
Query: 183 gaagagtggatggaaagattgtcaaagttagaagagaagtcaggaaggaccagagtaaaa 242
|||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 154 gaagagaggatggaaagattttcaaagttagaagagaggtcaggaaggaccagagtaaaa 95
Query: 243 catgccattgggacatgaaaggatggctgtactcatgaactcacagcaact--gtggttg 300
||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 94 catgccattgggacatgaaaggatggctgtactcatgaactca-------tgagtggttg 42
Query: 301 gctgcataagtcctgcacaagactaaaccattcaacatact 341
|||||||||||||||||||||||||||||| ||||||||||
Sbjct: 41 gctgcataagtcctgcacaagactaaaccactcaacatact 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no298_o19.g1 MSMg01no298_o19.g1 CHROMAT_FILE:
MSMg01no298_o19.g1 PHD_FILE: MSMg01no298_o19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:42 2005
(665 letters)
>mm_chr9_87759193_87760257
Length = 1065
Score = 1270 bits (657), Expect = 0.0
Identities = 663/665 (99%)
Strand = Plus / Plus
Query: 1 tcttggccttagataaaaactggaccatctttttaaatacccttattttctgtgggcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttggccttagataaaaactggaccatctttttaaatacccttattttctgtgggcaaa 260
Query: 61 atgctgagatgttcttgttaccaggtaaacaatatgcactgactttttttctctgaattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgctgagatgttcttgttaccaggtaaacaatatgcactgactttttttctctgaattt 320
Query: 121 aaggaataaatagatatactgttcactcctaaatgacaggtgaattataaaactcactct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaggaataaatagatatactgttcactcctaaatgacaggtgaattataaaactcactct 380
Query: 181 ttccttcagatatacaagcttaaagacagcttttaaagaatgattttatttgggtcatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttccttcagatatacaagcttaaagacagcttttaaagaatgattttatttgggtcatgc 440
Query: 241 cctcacatttagccttatcagagcctaaagggatacaagtaaaaagtaaggaataaaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctcacatttagccttatcagagcctaaagggatacaagtaaaaagtaaggaataaaatc 500
Query: 301 cactttaccatctaaaaatataatttactcattatttctcaatgactttgctactctaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cactttaccatctaaaaatataatttactcattatttctcaatgactttgctactctaca 560
Query: 361 atcttttaaaaatagaaaattccctccgtttctaataagattaccatttaagggtgtatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atcttttaaaaatagaaaattccctccgtttctaataagattaccatttaagggtgtatg 620
Query: 421 tgagagtgataaaggtctctaagtgtgactaaggttccaatcttgtgacatgtggaataa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgagagtgataaaggtctctaagtgtgactaaggttccaatcttgtgacatgtggaataa 680
Query: 481 cctatgtaattatactccctttactcttacagaaaagcccaagtgactgtaatacatgct 540
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 681 cctatgtaattatactccctttacacttacagaaaagcccaagtgactgtaatacatgct 740
Query: 541 aacttaatctcagccacagaaaatgtgtttctgattttcaaattcggcaattcttcaata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aacttaatctcagccacagaaaatgtgtttctgattttcaaattcggcaattcttcaata 800
Query: 601 aaagttgttgcacttcgtctgatctattctcgaaatacggaagtgcttgaagtccgacca 660
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 801 aaagttgttgcacttcgtctgatctattctcaaaatacggaagtgcttgaagtccgacca 860
Query: 661 cctgc 665
|||||
Sbjct: 861 cctgc 865
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space: 691025
Effective search space used: 691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
