Query= MSMg01no301_e24.b1 MSMg01no301_e24.b1 CHROMAT_FILE:
MSMg01no301_e24.b1 PHD_FILE: MSMg01no301_e24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:41 2005
(637 letters)
>mm_chr9_59593487_59594523
Length = 1037
Score = 1170 bits (605), Expect = 0.0
Identities = 623/629 (99%)
Strand = Plus / Minus
Query: 9 tcactctgtatatcaggctggcctcgaactcagaaattcacctgcctctgcctcccaagt 68
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1037 tcactctgtagatcaggctggcctcgaactcagaaattcacctgcctctgcctcccaagt 978
Query: 69 gctgggattaaaggcgtgcgccaccacgcccggcataggatacctgttctcatctatagc 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977 gctgggattaaaggcgtgcgccaccacgcccggcataggatacctgttctcatctatagc 918
Query: 129 ctaccacgctacacaaaccagatctcatctgatttcagaagcaaagcagggtcaaacctg 188
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 ctaccacgctacacagaccagatctcatctgatttcagaagcaaagcagggtcaaacctg 858
Query: 189 gttgttactaagatgggagaacattgttgccaatcctttcaacccctaaaatgagtaaaa 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 gttgttactaagatgggagaacattgttgccaatcctttcaacccctaaaatgagtaaaa 798
Query: 249 ctcattaacaaaaagatcctcaaggcccagagaaccatctccttagacaccaatgagtgt 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 ctcattaacaaaaagatcctcaaggcccagagaaccatctccttagacaccaatgagtgt 738
Query: 309 accaacttaccactcaaatccgagttggtacccaaattacgtgcttatcaagtacagtta 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 accaacttaccactcaaatccgagttggtacccaaattacgtgcttatcaagtacagtta 678
Query: 369 aaaggcgaatggagtttcagaacgactaatcagagtactcttccttaatttgcggagcca 428
||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 677 aaaggtgaatggagtttcagaacgactaatcagagtactgttccttaacttgcggagcca 618
Query: 429 ggttctctgagaagccgtcttctttagcattacttgcttgtactgactttctgtccacca 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ggttctctgagaagccgtcttctttagcattacttgcttgtactgactttctgtccacca 558
Query: 489 cagactagaaactcaagctctgtaaagtgtgaggttccactattcgtcccctttgtgagg 548
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 557 cagactagaaactcaagctctgtaaagtgtgaggttccgctattcgtcccctttgtgagg 498
Query: 549 tgggggatgggaacaagattatctgacattggaaataacactaaaagctagtgaagcttt 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tgggggatgggaacaagattatctgacattggaaataacactaaaagctagtgaagcttt 438
Query: 609 taagaatttcattgcttatagaaaaatct 637
|||||||||||||||||||||||||||||
Sbjct: 437 taagaatttcattgcttatagaaaaatct 409
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no301_e24.g1 MSMg01no301_e24.g1 CHROMAT_FILE:
MSMg01no301_e24.g1 PHD_FILE: MSMg01no301_e24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:41 2005
(291 letters)
>mm_chr9_59401342_59402033
Length = 692
Score = 532 bits (275), Expect = e-155
Identities = 287/291 (98%), Gaps = 1/291 (0%)
Strand = Plus / Plus
Query: 1 tgtgacatagttgatttgcattgtaacttcctctgtgatgaccgggcagcagcagagtct 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 tgtgacatagttgatttgcattgtaacttcctctgtgatgaccgggtagcagcagagtct 260
Query: 61 gccactcagcaggtactgcacagcagagtgtcctgaagccctctgagagcagctgctatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccactcagcaggtactgcacagcagagtgtcctgaagccctctgagagcagctgctatt 320
Query: 121 gagactgtaaactgtgcttggggctgttgagaagagactgatatggagtgtggccagctc 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 gagactgtaaactgtgcttggggctgttgagaagagactgatatggagagtggccagctc 380
Query: 181 gttcaaacatggtcagagcaggctgctggggaa-gtgggaacacaggctgagcaaaggct 239
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 gttcaaacatggtcagagcaggctgctggggaaagtgggaacacaggctgagcaaaggct 440
Query: 240 aaccatgaccagtcagggccggtgccaagggtaaataatgcccttcctttc 290
|||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaccatgaccaggcagggccggtgccaagggtaaataatgcccttcctttc 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 692
Length adjustment: 9
Effective length of query: 282
Effective length of database: 683
Effective search space: 192606
Effective search space used: 192606
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
